Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_M23
         (913 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    32   0.95 
AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    32   0.95 
AY058607-1|AAL13836.1|  999|Drosophila melanogaster LD30037p pro...    29   8.8  
AF159852-1|AAD54965.1|  999|Drosophila melanogaster RNA-binding ...    29   8.8  
AF132213-1|AAF61321.1|  999|Drosophila melanogaster smaug protei...    29   8.8  
AE014296-1566|AAN11981.1|  999|Drosophila melanogaster CG5263-PC...    29   8.8  
AE014296-1565|AAF50334.3|  999|Drosophila melanogaster CG5263-PB...    29   8.8  
AE014296-1564|AAF50333.3|  999|Drosophila melanogaster CG5263-PA...    29   8.8  

>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 32.3 bits (70), Expect = 0.95
 Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
 Frame = +2

Query: 524 PFGXXXXGGXGXPXKSGXXGXPL-KPXXXPPPXPXKXPXXXXPNXPAX*VGXK*GAYLAA 700
           P G     G G P   G  G    +P   PPP P   P    P  P    G   G ++  
Sbjct: 212 PPGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYPGPWIPL 271

Query: 701 XIPLP 715
            +P+P
Sbjct: 272 PVPVP 276


>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 32.3 bits (70), Expect = 0.95
 Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
 Frame = +2

Query: 524 PFGXXXXGGXGXPXKSGXXGXPL-KPXXXPPPXPXKXPXXXXPNXPAX*VGXK*GAYLAA 700
           P G     G G P   G  G    +P   PPP P   P    P  P    G   G ++  
Sbjct: 214 PPGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYPGPWIPL 273

Query: 701 XIPLP 715
            +P+P
Sbjct: 274 PVPVP 278


>AY058607-1|AAL13836.1|  999|Drosophila melanogaster LD30037p
           protein.
          Length = 999

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 298 SNYKFVANNVYVXSLFFSLWLDPETT--FYTLLPLLKYVSLKFLHF 167
           SN  F      V +LF   W D E T   Y LL  L+Y SLKFL +
Sbjct: 70  SNALFCEQVTTVTNLF-EKWNDCERTVVMYALLKRLRYPSLKFLQY 114


>AF159852-1|AAD54965.1|  999|Drosophila melanogaster RNA-binding
           protein Smaug protein.
          Length = 999

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 298 SNYKFVANNVYVXSLFFSLWLDPETT--FYTLLPLLKYVSLKFLHF 167
           SN  F      V +LF   W D E T   Y LL  L+Y SLKFL +
Sbjct: 70  SNALFCEQVTTVTNLF-EKWNDCERTVVMYALLKRLRYPSLKFLQY 114


>AF132213-1|AAF61321.1|  999|Drosophila melanogaster smaug protein
           protein.
          Length = 999

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 298 SNYKFVANNVYVXSLFFSLWLDPETT--FYTLLPLLKYVSLKFLHF 167
           SN  F      V +LF   W D E T   Y LL  L+Y SLKFL +
Sbjct: 70  SNALFCEQVTTVTNLF-EKWNDCERTVVMYALLKRLRYPSLKFLQY 114


>AE014296-1566|AAN11981.1|  999|Drosophila melanogaster CG5263-PC,
           isoform C protein.
          Length = 999

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 298 SNYKFVANNVYVXSLFFSLWLDPETT--FYTLLPLLKYVSLKFLHF 167
           SN  F      V +LF   W D E T   Y LL  L+Y SLKFL +
Sbjct: 70  SNALFCEQVTTVTNLF-EKWNDCERTVVMYALLKRLRYPSLKFLQY 114


>AE014296-1565|AAF50334.3|  999|Drosophila melanogaster CG5263-PB,
           isoform B protein.
          Length = 999

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 298 SNYKFVANNVYVXSLFFSLWLDPETT--FYTLLPLLKYVSLKFLHF 167
           SN  F      V +LF   W D E T   Y LL  L+Y SLKFL +
Sbjct: 70  SNALFCEQVTTVTNLF-EKWNDCERTVVMYALLKRLRYPSLKFLQY 114


>AE014296-1564|AAF50333.3|  999|Drosophila melanogaster CG5263-PA,
           isoform A protein.
          Length = 999

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 298 SNYKFVANNVYVXSLFFSLWLDPETT--FYTLLPLLKYVSLKFLHF 167
           SN  F      V +LF   W D E T   Y LL  L+Y SLKFL +
Sbjct: 70  SNALFCEQVTTVTNLF-EKWNDCERTVVMYALLKRLRYPSLKFLQY 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,112,230
Number of Sequences: 53049
Number of extensions: 643160
Number of successful extensions: 1624
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)