Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_M23
         (913 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79602-1|CAB01888.3|  508|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z19158-6|CAA79575.2|  615|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z19156-3|CAA79564.2|  615|Caenorhabditis elegans Hypothetical pr...    29   6.1  
AF101312-2|AAC69222.2|  475|Caenorhabditis elegans Hypothetical ...    29   6.1  
AF079899-1|AAC83661.1|  615|Caenorhabditis elegans sodium- and c...    29   6.1  
U97009-1|AAC69030.2|  339|Caenorhabditis elegans Serpentine rece...    28   8.1  
U58736-1|AAB00598.1|  302|Caenorhabditis elegans Dumpy : shorter...    28   8.1  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z79602-1|CAB01888.3|  508|Caenorhabditis elegans Hypothetical
           protein K09E9.1 protein.
          Length = 508

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
 Frame = -1

Query: 292 YKFVANNVYVXSLFFSLWLDPETTFY--TLLPLLKYVSLKFLHFFLH 158
           Y F+A+++     +FS+ + P   +Y  T++ +LK++ L F  FFL+
Sbjct: 329 YSFMASSIVSFGFYFSIDVLPGNRYYNMTIMGILKFI-LGFTPFFLN 374


>Z19158-6|CAA79575.2|  615|Caenorhabditis elegans Hypothetical
           protein T23G5.5 protein.
          Length = 615

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = -1

Query: 301 YSNYKFVANNVYVXSLFFSLWLDPETTF---YTLLPLLKYVSLK 179
           YS+Y    NNVYV +LF S +++  T+F   + +  +L Y+S K
Sbjct: 325 YSSYNDFHNNVYVDALFTS-FINCATSFLSGFVIFSVLGYMSCK 367


>Z19156-3|CAA79564.2|  615|Caenorhabditis elegans Hypothetical
           protein T23G5.5 protein.
          Length = 615

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = -1

Query: 301 YSNYKFVANNVYVXSLFFSLWLDPETTF---YTLLPLLKYVSLK 179
           YS+Y    NNVYV +LF S +++  T+F   + +  +L Y+S K
Sbjct: 325 YSSYNDFHNNVYVDALFTS-FINCATSFLSGFVIFSVLGYMSCK 367


>AF101312-2|AAC69222.2|  475|Caenorhabditis elegans Hypothetical
           protein F56E10.3 protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 21/64 (32%), Positives = 28/64 (43%)
 Frame = -1

Query: 334 FXFLSTXFNHIYSNYKFVANNVYVXSLFFSLWLDPETTFYTLLPLLKYVSLKFLHFFLHI 155
           F FLS   + I+    +     Y     FSL L P  TF   +P   + S KF  F  +I
Sbjct: 169 FCFLSVYISRIFQENLYSTTTTYTSISLFSLSLFP-FTFPFSIPYFLF-SYKFPSFCRNI 226

Query: 154 SSIP 143
            +IP
Sbjct: 227 HTIP 230


>AF079899-1|AAC83661.1|  615|Caenorhabditis elegans sodium- and
           chloride-dependentantidepressant- and cocaine-sensitive
           dopamine transporterprotein.
          Length = 615

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = -1

Query: 301 YSNYKFVANNVYVXSLFFSLWLDPETTF---YTLLPLLKYVSLK 179
           YS+Y    NNVYV +LF S +++  T+F   + +  +L Y+S K
Sbjct: 325 YSSYNDFHNNVYVDALFTS-FINCATSFLSGFVIFSVLGYMSCK 367


>U97009-1|AAC69030.2|  339|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 32 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -1

Query: 328 FLSTXFNHIYSNYKFVANNVYVXSLFFSLWLDPETTFYTLLPLLKYV 188
           FLST F H+    KF    + +  L  S  +DP  T Y + P  KY+
Sbjct: 256 FLSTQF-HVIETTKF--GYIIISLLSLSPTIDPLVTIYYVQPYRKYI 299


>U58736-1|AAB00598.1|  302|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 3 protein.
          Length = 302

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = +2

Query: 545 GGXGXPXKSGXXGXPLKPXXXPPPXPXKXPXXXXPNXP 658
           G  G P + G  G P K     PP P   P    P  P
Sbjct: 201 GAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQGP 238


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 19/61 (31%), Positives = 24/61 (39%)
 Frame = +3

Query: 594 NPFXPPPPGXXKXPXXXXXTXPPXRLAINRGPTSPPKFHFPWNLGKIIILRNPARTGESP 773
           +P  PPPP   +         PP R+     P SPP    P  +      R P RT  SP
Sbjct: 121 SPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPP--MTPPSPQRRPPRTPPSP 178

Query: 774 Q 776
           +
Sbjct: 179 E 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,493,003
Number of Sequences: 27780
Number of extensions: 323040
Number of successful extensions: 1167
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)