Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_M22
         (931 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0R2X6 Cluster: Putative uncharacterized protein; n=2; ...    37   0.64 
UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces cap...    36   1.1  
UniRef50_A0GMB5 Cluster: SH3, type 3 precursor; n=2; Burkholderi...    34   4.5  

>UniRef50_A0R2X6 Cluster: Putative uncharacterized protein; n=2;
           Mycobacterium|Rep: Putative uncharacterized protein -
           Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
          Length = 377

 Score = 37.1 bits (82), Expect = 0.64
 Identities = 23/80 (28%), Positives = 23/80 (28%)
 Frame = +3

Query: 450 PXPPXXXPXXXPPPXXGXXXXXXXXXXGXGPPPXGGXXPXXPXXGXXXXXXXXGXXXXXG 629
           P PP       PPP  G          G GPPP GG  P  P  G              G
Sbjct: 19  PPPPPDGGYPPPPPPDGGYPPAQPG--GFGPPPQGGYPPPPPPGGYPPPPQGGFPPPPPG 76

Query: 630 XXXXPPPXXXXXXXPXXXXG 689
               PPP       P    G
Sbjct: 77  GYPPPPPPQGGSYPPPPPPG 96


>UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 757

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 23/78 (29%), Positives = 23/78 (29%)
 Frame = -1

Query: 649 GGGXXXXPXXXXXPXXXXNXXXPXXGXXGXXPPXGGGPXPXXXXXXXXXXPXXGGGKXXG 470
           GGG    P                 G  G     GGG  P          P  GGG   G
Sbjct: 345 GGGGGGPPGRGGGGGGGGGPPEGGGGSDGAPGRGGGGGGPPGGGGGGGGPPGGGGGGGGG 404

Query: 469 XXXGGXGXXXGXKXGGGG 416
              GG G   G   GGGG
Sbjct: 405 PPGGGGGGPPGSGGGGGG 422



 Score = 36.3 bits (80), Expect = 1.1
 Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
 Frame = -1

Query: 583 PXXGXXGXXPPXGGGPX--PXXXXXXXXXXPXXGGGKXXGXXXGGXGXXXGXKXGGGG 416
           P  G  G  PP GGG    P          P  GGG       GG G   G   GGGG
Sbjct: 375 PGRGGGGGGPPGGGGGGGGPPGGGGGGGGGPPGGGGGGPPGSGGGGGGGGGPPEGGGG 432



 Score = 33.5 bits (73), Expect = 7.9
 Identities = 28/101 (27%), Positives = 28/101 (27%), Gaps = 9/101 (8%)
 Frame = -1

Query: 691 PPXXXXGXXXXXXXGGGXXXXPXXXXX----PXXXXNXXXPXXGXXGXXPPX-----GGG 539
           PP    G       GGG    P         P           G  G  PP      GGG
Sbjct: 364 PPEGGGGSDGAPGRGGGGGGPPGGGGGGGGPPGGGGGGGGGPPGGGGGGPPGSGGGGGGG 423

Query: 538 PXPXXXXXXXXXXPXXGGGKXXGXXXGGXGXXXGXKXGGGG 416
             P          P  GGG   G    G G   G   GGGG
Sbjct: 424 GGPPEGGGGSDGAPGRGGGGGGGGGPPGGGGGGGGPPGGGG 464


>UniRef50_A0GMB5 Cluster: SH3, type 3 precursor; n=2;
           Burkholderia|Rep: SH3, type 3 precursor - Burkholderia
           phytofirmans PsJN
          Length = 316

 Score = 34.3 bits (75), Expect = 4.5
 Identities = 19/53 (35%), Positives = 20/53 (37%)
 Frame = -1

Query: 574 GXXGXXPPXGGGPXPXXXXXXXXXXPXXGGGKXXGXXXGGXGXXXGXKXGGGG 416
           G  G  PP  GGP            P  GGG+  G   GG G   G    GGG
Sbjct: 248 GNAGGRPP--GGPQGNAGGRPQGSPPQGGGGRPPGGGNGGEGQGGGHGGNGGG 298


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,942,399
Number of Sequences: 1657284
Number of extensions: 5655588
Number of successful extensions: 21127
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15705
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85670899699
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)