Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_M21
         (852 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   6.7  
AY062194-1|AAL58555.1|  151|Anopheles gambiae cytochrome P450 CY...    23   8.9  

>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
 Frame = +1

Query: 388 ILVVLWSWRRQGSSDHEE-QPQIPDDDRRWERKLFDGKTIYVHLLSNEAISQRPNMDFSK 564
           IL  +  W+ +G S HE   P +          L     + V     E +S+  N  FS+
Sbjct: 382 ILATVGQWKHEGCSSHERLHPFMASQAASGTGTLTQFSELRVKAWRREFLSK--NATFSR 439

Query: 565 R-TVVYVGGYMDSPS 606
             +VV  G  +++PS
Sbjct: 440 PVSVVLKGRLLENPS 454


>AY062194-1|AAL58555.1|  151|Anopheles gambiae cytochrome P450
           CYP4D16 protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -3

Query: 529 LHLIISVRRSFCRQKVSVPNDGHRQVFEAVLRDHCFPVASRTTV 398
           +H +  V +   R   SVP  G + + +A +    FP  S T +
Sbjct: 58  MHYLDLVIKETLRLYPSVPMFGRKMMEDAEINGKVFPAGSNTII 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,093
Number of Sequences: 2352
Number of extensions: 16863
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)