Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_M20
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 96 3e-20
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 96 3e-20
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 83 3e-16
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 83 3e-16
Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical pr... 75 9e-14
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 60 3e-09
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 60 3e-09
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 58 8e-09
CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical... 52 5e-07
CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical... 51 9e-07
AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidas... 51 9e-07
AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidas... 51 9e-07
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 49 5e-06
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical... 49 5e-06
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z34533-5|CAA84298.1| 781|Caenorhabditis elegans Hypothetical pr... 38 0.012
U61944-6|ABP49529.1| 529|Caenorhabditis elegans Hypothetical pr... 38 0.012
AF036701-2|AAB88369.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.62
U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog (hedg... 30 2.5
U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 96.3 bits (229), Expect = 3e-20
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Frame = +2
Query: 281 DRLTPLVYPTNYDLVLKPDLKTGVFEGTVKINITVKADQKKIALHSKFLKIKGLSL-NRG 457
+RL PT+Y++ L P L F+G I++T+K + +H++ L I+ +SL +
Sbjct: 14 ERLPTFAEPTHYNVRLSPCLNQFSFDGHATIDVTIKEATDVLKVHAQSLLIQSVSLITQP 73
Query: 458 DEAISILKYSREKQSQQLVVHFENVLNSGNYQMNIEFSGDLTRKIVGFYLSHLKDN---- 625
+A L+ S + + L + + Q++ +F G+L K+ GFY S KD
Sbjct: 74 GDASKSLETSYDDKLNILTIKLPTTMQPQKVQLDFKFVGELNDKMRGFYRSQYKDKNGTE 133
Query: 626 RTMVASKFQPTYARQAFPCFDEPDFKATYDIAL 724
+ + +++F+ TYAR AFPCFDEP +KAT+D+ L
Sbjct: 134 KFLASTQFESTYARYAFPCFDEPIYKATFDVTL 166
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +3
Query: 747 ALSNMNEISVTXDPSSDLETVKFATXVPMSTYLAXF 854
ALSNMN IS T + V FAT MS+YL F
Sbjct: 174 ALSNMNVISETPTADGKRKAVTFATSPKMSSYLVAF 209
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 96.3 bits (229), Expect = 3e-20
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Frame = +2
Query: 281 DRLTPLVYPTNYDLVLKPDLKTGVFEGTVKINITVKADQKKIALHSKFLKIKGLSL-NRG 457
+RL PT+Y++ L P L F+G I++T+K + +H++ L I+ +SL +
Sbjct: 78 ERLPTFAEPTHYNVRLSPCLNQFSFDGHATIDVTIKEATDVLKVHAQSLLIQSVSLITQP 137
Query: 458 DEAISILKYSREKQSQQLVVHFENVLNSGNYQMNIEFSGDLTRKIVGFYLSHLKDN---- 625
+A L+ S + + L + + Q++ +F G+L K+ GFY S KD
Sbjct: 138 GDASKSLETSYDDKLNILTIKLPTTMQPQKVQLDFKFVGELNDKMRGFYRSQYKDKNGTE 197
Query: 626 RTMVASKFQPTYARQAFPCFDEPDFKATYDIAL 724
+ + +++F+ TYAR AFPCFDEP +KAT+D+ L
Sbjct: 198 KFLASTQFESTYARYAFPCFDEPIYKATFDVTL 230
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +3
Query: 747 ALSNMNEISVTXDPSSDLETVKFATXVPMSTYLAXF 854
ALSNMN IS T + V FAT MS+YL F
Sbjct: 238 ALSNMNVISETPTADGKRKAVTFATSPKMSSYLVAF 273
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 82.6 bits (195), Expect = 3e-16
Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Frame = +2
Query: 284 RLTPLVYPTNYDLVLKPDLKTGVFEGTVKINITVKADQKKIALHSKFLKIKGLSLNRGDE 463
RL P +YDL L P+L G E +V I I +K D K + L+++ L++K + +
Sbjct: 199 RLPRTAEPIDYDLTLHPNLTNGEVEASVSIRILIKNDTKLLILNAENLEMKSFDITKKGA 258
Query: 464 AISILKYSREKQSQQLVVHFENVLNSGNY-QMNIEFSGDLTRKIVGFYLS-HL-KDNRTM 634
+ + + Q L+ G++ + I +S + + G Y S HL D +
Sbjct: 259 KVKA-DFVKCAVMTQWAWKLAKRLHKGDHIVLTIYYSAQMKSDLQGLYFSTHLGTDGKKT 317
Query: 635 --VASKFQPTYARQAFPCFDEPDFKATYDIALVK 730
A++F+PT+AR+ PCFDEP+FKAT+ +A+++
Sbjct: 318 KSAATQFEPTFARKMLPCFDEPNFKATFQVAIIR 351
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 82.6 bits (195), Expect = 3e-16
Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Frame = +2
Query: 284 RLTPLVYPTNYDLVLKPDLKTGVFEGTVKINITVKADQKKIALHSKFLKIKGLSLNRGDE 463
RL P +YDL L P+L G E +V I I +K D K + L+++ L++K + +
Sbjct: 199 RLPRTAEPIDYDLTLHPNLTNGEVEASVSIRILIKNDTKLLILNAENLEMKSFDITKKGA 258
Query: 464 AISILKYSREKQSQQLVVHFENVLNSGNY-QMNIEFSGDLTRKIVGFYLS-HL-KDNRTM 634
+ + + Q L+ G++ + I +S + + G Y S HL D +
Sbjct: 259 KVKA-DFVKCAVMTQWAWKLAKRLHKGDHIVLTIYYSAQMKSDLQGLYFSTHLGTDGKKT 317
Query: 635 --VASKFQPTYARQAFPCFDEPDFKATYDIALVK 730
A++F+PT+AR+ PCFDEP+FKAT+ +A+++
Sbjct: 318 KSAATQFEPTFARKMLPCFDEPNFKATFQVAIIR 351
>Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical
protein R03G8.6 protein.
Length = 747
Score = 74.5 bits (175), Expect = 9e-14
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 14/164 (8%)
Frame = +2
Query: 284 RLTPLVYPTNYDLVLKP---------DLKTGVFEGTVKINITVKADQKKIALHSKFLKIK 436
RL V P++YD+ +K D FEG V I + +K K+ LHS L I
Sbjct: 31 RLPRHVSPSHYDIHIKTYLPGYGWKADENKITFEGNVNILLDIKETTDKLVLHSSSLNII 90
Query: 437 GLSLNRGDEAISILKYSREKQSQQLVVHFENVLN-SGNYQMNIEFSGDLTRKIVGFYLSH 613
+ ++ +SI ++ + +SQ L + N + + + I F G + +G + ++
Sbjct: 91 SATFQSDEQNVSISHWNVQTESQFLTFYLNNTVKVQSSAGIQINFQGKVRTDGLGLFATN 150
Query: 614 L--KDNRTMV--ASKFQPTYARQAFPCFDEPDFKATYDIALVKP 733
+D M A++F+ +AR PCFDEP+FKAT++++L P
Sbjct: 151 STREDGTVMTNFATQFETIFARNMIPCFDEPEFKATWNVSLEHP 194
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 59.7 bits (138), Expect = 3e-09
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Frame = +2
Query: 284 RLTPLVYPTNYDLVLKP---------DLKTGVFEGTVKINITVKADQKKIALHSKFLK-- 430
RL V P +Y L +K D FEG V I + + KK++L+SK L
Sbjct: 73 RLPTSVSPISYQLTVKTYLPGYGYTADKNNLTFEGQVLIELNITKSIKKVSLNSKDLNYT 132
Query: 431 ---IKGLSLNRGDEAISILKYSREKQSQQLVVHF-ENVLNSGNYQMNIEFSGDLTRKIVG 598
IK S+ ++I+ ++ +++ + E V + + + + F L + G
Sbjct: 133 EEFIKKSSILVNGKSIAFTLDDKQSTHEKIFFNLDETVEPTTSATLKVAFGAPLRTDMSG 192
Query: 599 FY---LSHLKDNRTMVA-SKFQPTYARQAFPCFDEPDFKATYDIALVKPEXVCGI 751
Y ++ K M A ++ +P YAR+ PCFDEP +KAT+ + ++ P +
Sbjct: 193 LYQTTYTNSKGESKMAAVTQMEPVYARRMVPCFDEPAYKATWTVTVIHPNKTVAV 247
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 59.7 bits (138), Expect = 3e-09
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Frame = +2
Query: 284 RLTPLVYPTNYDLVLKP---------DLKTGVFEGTVKINITVKADQKKIALHSKFLK-- 430
RL V P +Y L +K D FEG V I + + KK++L+SK L
Sbjct: 85 RLPTSVSPISYQLTVKTYLPGYGYTADKNNLTFEGQVLIELNITKSIKKVSLNSKDLNYT 144
Query: 431 ---IKGLSLNRGDEAISILKYSREKQSQQLVVHF-ENVLNSGNYQMNIEFSGDLTRKIVG 598
IK S+ ++I+ ++ +++ + E V + + + + F L + G
Sbjct: 145 EEFIKKSSILVNGKSIAFTLDDKQSTHEKIFFNLDETVEPTTSATLKVAFGAPLRTDMSG 204
Query: 599 FY---LSHLKDNRTMVA-SKFQPTYARQAFPCFDEPDFKATYDIALVKPEXVCGI 751
Y ++ K M A ++ +P YAR+ PCFDEP +KAT+ + ++ P +
Sbjct: 205 LYQTTYTNSKGESKMAAVTQMEPVYARRMVPCFDEPAYKATWTVTVIHPNKTVAV 259
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 58.0 bits (134), Expect = 8e-09
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Frame = +2
Query: 284 RLTPLVYPTNYDLVL---------KPDLKTGVFEGTVKINITVKADQKKIALHSKFLKIK 436
RL V+PT Y L + + D K+ F G VKI I VK + I LH+ L I
Sbjct: 31 RLPRNVFPTEYRLHITTFLPGYKWEADEKSFTFIGDVKIQIEVKEETDTIVLHTDSLNIN 90
Query: 437 GLSLNRGDEAISILKYSREKQSQQLVVHFENVLNSGNYQMNIEFSGDLTRKIVGFY--LS 610
+ L+ ++ + + + FEN + + G + G+Y +S
Sbjct: 91 NVLLHNACVCANLKNLIQ--YFRLAITKFENRQQTNSKYSLYGKIGKIREDGEGYYRTIS 148
Query: 611 HLKDNRTM--VASKFQPTYARQAFPCFDEPDFKATYDIALVKP 733
+ TM ++F+PT AR PCFDEP+FKA + + +V P
Sbjct: 149 PGLNETTMYNAVTQFEPTAARFMVPCFDEPEFKAIWHVTVVHP 191
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 723 LLNPXGYVALSNMNEISVTXDPSSDLETVKFATXVPMSTY-LAXFGG 860
+++P G ALSN EI T + D T +F + + MS+Y LA F G
Sbjct: 188 VVHPTGSTALSNAKEIDNT-KTNDDFSTTEFESTLKMSSYILAIFVG 233
>CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical
protein C42C1.11c protein.
Length = 608
Score = 52.0 bits (119), Expect = 5e-07
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Frame = +2
Query: 308 TNYDLVLKPDLKTGVFEGTVKINITVKADQKKIALHSKFLKIKGLSLNRGDEAISILKYS 487
++Y L K D + G V I + VK D ++I L ++ L ++ ++LN E
Sbjct: 21 SHYALKWKVDFEKKHIAGDVSITLDVKQDTERIVLDTRDLSVQSVALNLNGEPKKAGFTL 80
Query: 488 REKQS--QQLVVHFENVLNSGNYQMNIEFSGDLTRKIVGFYLSHLKDNRT-MVASKFQPT 658
+ Q+ Q+LV+ E++ + + I++ + F + +R + S+ Q
Sbjct: 81 EDNQALGQKLVITTESLKSGDRPVLEIKYESSNNAAALQFLTAEQTTDRAPYLFSQCQAI 140
Query: 659 YARQAFPCFDEPDFKATYDIALVKP 733
AR PC D P K+TY+ + P
Sbjct: 141 NARSIVPCMDTPSVKSTYEAEVCVP 165
>CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical
protein C42C1.11a protein.
Length = 609
Score = 51.2 bits (117), Expect = 9e-07
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Frame = +2
Query: 308 TNYDLVLKPDLKTGVFEGTVKINITVKADQKKIALHSKFLKIKGLSLNRGDEAISILKYS 487
++Y L K D + G V I + VK D ++I L ++ L ++ ++LN E
Sbjct: 21 SHYALKWKVDFEKKHIAGDVSITLDVKQDTERIVLDTRDLSVQSVALNLNGEPKKAGFTL 80
Query: 488 REKQS--QQLVVHFENVLNSGNYQMNIEFSGDLTRKIVGFYLSHLKDNRTM--VASKFQP 655
+ Q+ Q+LV+ E++ + + I++ + F + +R + S+ Q
Sbjct: 81 EDNQALGQKLVITTESLKSGDRPVLEIKYESSNNAAALQFLTAEQTTDRVAPYLFSQCQA 140
Query: 656 TYARQAFPCFDEPDFKATYDIALVKP 733
AR PC D P K+TY+ + P
Sbjct: 141 INARSIVPCMDTPSVKSTYEAEVCVP 166
>AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 51.2 bits (117), Expect = 9e-07
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Frame = +2
Query: 308 TNYDLVLKPDLKTGVFEGTVKINITVKADQKKIALHSKFLKIKGLSLNRGDEAISILKYS 487
++Y L K D + G V I + VK D ++I L ++ L ++ ++LN E
Sbjct: 21 SHYALKWKVDFEKKHIAGDVSITLDVKQDTERIVLDTRDLSVQSVALNLNGEPKKAGFTL 80
Query: 488 REKQS--QQLVVHFENVLNSGNYQMNIEFSGDLTRKIVGFYLSHLKDNRTM--VASKFQP 655
+ Q+ Q+LV+ E++ + + I++ + F + +R + S+ Q
Sbjct: 81 EDNQALGQKLVITTESLKSGDRPVLEIKYESSNNAAALQFLTAEQTTDRVAPYLFSQCQA 140
Query: 656 TYARQAFPCFDEPDFKATYDIALVKP 733
AR PC D P K+TY+ + P
Sbjct: 141 INARSIVPCMDTPSVKSTYEAEVCVP 166
>AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 51.2 bits (117), Expect = 9e-07
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Frame = +2
Query: 308 TNYDLVLKPDLKTGVFEGTVKINITVKADQKKIALHSKFLKIKGLSLNRGDEAISILKYS 487
++Y L K D + G V I + VK D ++I L ++ L ++ ++LN E
Sbjct: 21 SHYALKWKVDFEKKHIAGDVSITLDVKQDTERIVLDTRDLSVQSVALNLNGEPKKAGFTL 80
Query: 488 REKQS--QQLVVHFENVLNSGNYQMNIEFSGDLTRKIVGFYLSHLKDNRTM--VASKFQP 655
+ Q+ Q+LV+ E++ + + I++ + F + +R + S+ Q
Sbjct: 81 EDNQALGQKLVITTESLKSGDRPVLEIKYESSNNAAALQFLTAEQTTDRVAPYLFSQCQA 140
Query: 656 TYARQAFPCFDEPDFKATYDIALVKP 733
AR PC D P K+TY+ + P
Sbjct: 141 INARSIVPCMDTPSVKSTYEAEVCVP 166
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 48.8 bits (111), Expect = 5e-06
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Frame = +2
Query: 293 PLVYPTNYDLVL--KPDLKTGVFEGTVKINITV---KADQKKIALHSKFLKIKGLSLNRG 457
PL+Y L + +P + G +VK ++ V +I LHS + G + R
Sbjct: 159 PLLYEVELKLFVPWRPTISFGSDNFSVKGHVRVHFTSGGGSRILLHSDSKQHIGDCVVRD 218
Query: 458 DEAISI-LKYSREKQSQQLVVHFE-NVLNSGNYQMNIEFSGDLTRKIV-GFYLSHL---K 619
+ +I +K + SQ L ++ E ++++ NY +++ F + + G + +
Sbjct: 219 ELNRNITVKLVGRQYSQILDLNLETDMIHGMNYTLDVAFKSAINLNLAYGLFAAPYTFEN 278
Query: 620 DNRTMVASKFQPTYARQAFPCFDEPDFKATYDIALVKPEXVCGI 751
+ R +VA++ Q + AR FPC D PD KA +D ++ P I
Sbjct: 279 ETRYVVATQLQISEARTVFPCIDVPDMKAQFDTVIIHPTGTTSI 322
>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
protein Y67D8C.9 protein.
Length = 1073
Score = 48.8 bits (111), Expect = 5e-06
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Frame = +2
Query: 299 VYPTNYDLVLK-PDLKTGVF-EGTVKINITV--KADQKKIALH-SKFLKIKGLSLNRGDE 463
+ P +YDL L T +F + I++ + + +I H +K++ + L + +
Sbjct: 129 ILPYHYDLQLDFSQFDTHLFIRANISIHLESYGNSTEDEIQFHLGPNIKMERMRLRKDGK 188
Query: 464 AISILKYSREKQSQQLVVHFENVLNSGNYQMNIEFSGDLTRKIVGFYLSHLKDNRTMVAS 643
+ RE+ + + + L G Y + + ++ + + V D T +
Sbjct: 189 KFYAKTFKREESKKLGRISLRDPLQKGKYILEMTYNMTICDEDV--------DGATSFTT 240
Query: 644 KFQPTYARQAFPCFDEPDFKATYDIAL 724
KF+PT AR FPC+DEP KAT++I++
Sbjct: 241 KFEPTLARAFFPCWDEPGVKATFNISV 267
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
protein T16G12.1 protein.
Length = 1890
Score = 43.6 bits (98), Expect = 2e-04
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Frame = +2
Query: 284 RLTPLVYPTNYDLVLKPDL----------KTGVFEGTVKINITVKADQKKIALHSKFLKI 433
RL P +Y +Y L +P K F+G I + + L++ KI
Sbjct: 80 RLPPNLYAIDYSLWFQPYFPSPGVQYAPEKNFTFDGRASIQVEALVASDRFILNAYNFKI 139
Query: 434 KGLSLNRGD-EAISILKYSREKQSQQL--VVHFENVLNSGNYQMNIEFSGDLTRKIVG-- 598
+ + D + I S++ +QQL + + V+ Y + ++G + G
Sbjct: 140 QSYKVVDIDGTVVPINSISQDDTTQQLSLITNANGVVAGQIYNIEFVYTGIINPYTDGGV 199
Query: 599 FYLSHLK---DNRTMVASKFQPTYARQAFPCFDEPDFKATYDIALVKP 733
+Y S+ + M+A+ +P AR+ FP DEP +KA + I + P
Sbjct: 200 YYTSYNDPQGNTHYMIATHMEPFSARKVFPSLDEPSYKAKFTITVQYP 247
Score = 30.3 bits (65), Expect = 1.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 662 ARQAFPCFDEPDFKATYDIALVKP 733
AR PC+DEP +K +++++ P
Sbjct: 1148 ARSLLPCWDEPSYKGQFEVSVFHP 1171
>Z34533-5|CAA84298.1| 781|Caenorhabditis elegans Hypothetical
protein B0285.7 protein.
Length = 781
Score = 37.5 bits (83), Expect = 0.012
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Frame = +2
Query: 275 DCDRLTPLVYPTNYDLVLKPDLKTGVFEGTVKINITVKADQKKIALHSKFL-------KI 433
D + P+ Y N + D++ V EG +++ + K + I+LHS + +I
Sbjct: 171 DPSKFQPIHYVLNITI---RDVRKPVLEGHMQLFASTKDQVQAISLHSVKIHNLENRDRI 227
Query: 434 KGLSLNRGDEAISILKYSREKQSQQLVVHFENVLN-SGNYQMNIEFSGDLTRKIVGFYLS 610
++ N G E I + SR Q L+ H E + S + ++ G ++
Sbjct: 228 HVVNCNTG-ETICV---SRVHQIDDLI-HLELAQSISSGVNLRVDIDGFISADSGPHVFK 282
Query: 611 HLKDNR----TMVASKFQPTYARQAFPCFDEPDFKATYDIAL 724
+ + M+ S F+PT AR FP FD + K+T+++ L
Sbjct: 283 QIPTAKWRVPQMIGSVFEPTSARHVFPSFDLHNQKSTFNLCL 324
>U61944-6|ABP49529.1| 529|Caenorhabditis elegans Hypothetical
protein T12E12.6 protein.
Length = 529
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 623 NRTMVASKFQPTYARQAFPCFDEPDFKATYDIALVKP 733
N + + QP +AR+ FPC D P KA + +++V P
Sbjct: 18 NPLLYTTHLQPNHARRLFPCIDHPAVKALFRLSIVHP 54
>AF036701-2|AAB88369.2| 625|Caenorhabditis elegans Hypothetical
protein ZC416.6 protein.
Length = 625
Score = 31.9 bits (69), Expect = 0.62
Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 5/130 (3%)
Frame = +2
Query: 359 GTVKINITVKADQKKIALHSKFLKIKGLSLNRGD----EAISILKYSREKQSQQLVVHFE 526
G + D K+ L + L I+ +S+N D A ++ + K S L F+
Sbjct: 42 GQATLRCRCLTDATKLVLDVRDLSIRSVSINGVDCDFRIAPNVYTFFGSKMSVYLPPQFQ 101
Query: 527 NVLNSGNYQMNIEFSGDLTRKIVGFYLSHLKDNRT-MVASKFQPTYARQAFPCFDEPDFK 703
+ S D T + D R + S+ Q +AR PC D P K
Sbjct: 102 KAGTILQVTVAYGTSPDATA-LQWMKKEQTADKRMPYLFSQCQAIHARSIVPCMDTPSVK 160
Query: 704 ATYDIALVKP 733
+TY+ + P
Sbjct: 161 STYEAEVTVP 170
>U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 9 protein.
Length = 588
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/35 (34%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 491 EKQSQQLVVH-FENVLNSGNYQMNIEFSGDLTRKI 592
++ S+++ H FE++++ ++ NI FSGDL K+
Sbjct: 517 QRASERMFGHPFESIVSHADFAQNINFSGDLVCKL 551
>U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical
protein K11G12.6b protein.
Length = 766
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 213 LFFNKLASFLKLCVRSLVSISVVQHEESKFLLQS 112
+FF + LCVR+ ++IS+V S FLL S
Sbjct: 105 IFFKNIVCEQHLCVRAFLNISLVVRAFSLFLLAS 138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,194,189
Number of Sequences: 27780
Number of extensions: 373117
Number of successful extensions: 851
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -