Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_M19
         (907 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001592-1|AAN71347.1|  254|Drosophila melanogaster RE27327p pro...    31   2.2  
AF188633-1|AAF01456.1|  254|Drosophila melanogaster M protein pr...    31   2.2  
AE013599-2577|AAF57781.1|  254|Drosophila melanogaster CG14489-P...    31   2.2  
BT003486-1|AAO39489.1|  414|Drosophila melanogaster SD17309p pro...    31   2.9  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    30   5.0  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    30   5.0  

>BT001592-1|AAN71347.1|  254|Drosophila melanogaster RE27327p
           protein.
          Length = 254

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -3

Query: 314 KGRSAAAVLXXXXXXFSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASS 168
           +GR+ A V+       + S  +LPS+ F  ++ LR++RKL    SA  +
Sbjct: 11  EGRTGAKVIVGAVEQLAGSSEHLPSVHFPPSKPLRRRRKLQRQQSAVDT 59


>AF188633-1|AAF01456.1|  254|Drosophila melanogaster M protein
           protein.
          Length = 254

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -3

Query: 314 KGRSAAAVLXXXXXXFSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASS 168
           +GR+ A V+       + S  +LPS+ F  ++ LR++RKL    SA  +
Sbjct: 11  EGRTGAKVIVGAVEQLAGSSEHLPSVHFPPSKPLRRRRKLQRQQSAVDT 59


>AE013599-2577|AAF57781.1|  254|Drosophila melanogaster CG14489-PA
           protein.
          Length = 254

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -3

Query: 314 KGRSAAAVLXXXXXXFSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASS 168
           +GR+ A V+       + S  +LPS+ F  ++ LR++RKL    SA  +
Sbjct: 11  EGRTGAKVIVGAVEQLAGSSEHLPSVHFPPSKPLRRRRKLQRQQSAVDT 59


>BT003486-1|AAO39489.1|  414|Drosophila melanogaster SD17309p
           protein.
          Length = 414

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +3

Query: 72  PVPIPEPGSGTVSIIVPSXFKNECSTG*PKV 164
           PVP P PGSG VS+   +   N  ST  P V
Sbjct: 264 PVPPPPPGSGFVSVSASTSTSNTVSTTPPNV 294


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 536 ESANARGEAVCVLGALPLPRSLTRCARSXGCG 631
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 536 ESANARGEAVCVLGALPLPRSLTRCARSXGCG 631
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,088,781
Number of Sequences: 53049
Number of extensions: 532157
Number of successful extensions: 1207
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)