Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_M18
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-28|AAL27265.2| 322|Caenorhabditis elegans Hypothetical... 104 1e-22
AB275890-1|BAF34313.1| 322|Caenorhabditis elegans D-amino acid ... 104 1e-22
Z81484-2|CAB03970.2| 334|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AB275891-1|BAF34314.1| 334|Caenorhabditis elegans D-aspartate o... 46 4e-05
U53139-13|AAK18939.1| 334|Caenorhabditis elegans Hypothetical p... 40 0.002
AB275892-1|BAF34315.1| 334|Caenorhabditis elegans D-aspartate o... 40 0.002
AF002197-1|AAB53982.1| 383|Caenorhabditis elegans Hypothetical ... 36 0.038
AB275893-1|BAF34316.1| 383|Caenorhabditis elegans hypothetical ... 36 0.038
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 32 0.47
AC084155-9|AAO25978.1| 423|Caenorhabditis elegans Hypothetical ... 31 1.1
AC084155-8|AAG23358.2| 499|Caenorhabditis elegans Hypothetical ... 31 1.1
U80446-6|AAB37805.2| 783|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 28 7.7
>AC084158-28|AAL27265.2| 322|Caenorhabditis elegans Hypothetical
protein Y69A2AR.5 protein.
Length = 322
Score = 104 bits (249), Expect = 1e-22
Identities = 61/199 (30%), Positives = 104/199 (52%)
Frame = +2
Query: 56 VVGAGINGLTCALRIQEKYKKYRVVLLAKQFTPNTTGDGSAGLWYPFETGNTSSELLCKW 235
V+GAGING+ AL IQE+ V ++A++F+PNTT D +AGL PF + ++ W
Sbjct: 6 VLGAGINGIASALAIQERLPNCEVTIIAEKFSPNTTSDVAAGLIEPFLCDDDVDRII-NW 64
Query: 236 GTATYEFLHRLWLEGGLDVCAVPLSFVYRKPRNENKPDWGKHTFGYRQIGEKHLEYLSKR 415
+AT +H +G Y +++P W K + + ++ +++R
Sbjct: 65 TSATISRIHEYQADGN---PGAEEQSGYWLQSVKSEPKWLKLMKNVHILTDAEMKQVARR 121
Query: 416 HSQKFVSGHTFTTLIVPPTKLMAHFHKLFEEAGGRTLQVEVSSLEDPILGEYDVVVNCTG 595
KF G +TT + PT + F + GG+ + ++ +++D + YDV VNCTG
Sbjct: 122 PEHKF--GIFYTTWYLEPTPYIKWCTDKFLKNGGKFKKQKIENIDD-VARSYDVTVNCTG 178
Query: 596 IGARDLVPDNSVFSVKGQV 652
+G+R L+ D V+ +GQ+
Sbjct: 179 LGSRALIGDKEVYPTRGQI 197
>AB275890-1|BAF34313.1| 322|Caenorhabditis elegans D-amino acid
oxidase protein.
Length = 322
Score = 104 bits (249), Expect = 1e-22
Identities = 61/199 (30%), Positives = 104/199 (52%)
Frame = +2
Query: 56 VVGAGINGLTCALRIQEKYKKYRVVLLAKQFTPNTTGDGSAGLWYPFETGNTSSELLCKW 235
V+GAGING+ AL IQE+ V ++A++F+PNTT D +AGL PF + ++ W
Sbjct: 6 VLGAGINGIASALAIQERLPNCEVTIIAEKFSPNTTSDVAAGLIEPFLCDDDVDRII-NW 64
Query: 236 GTATYEFLHRLWLEGGLDVCAVPLSFVYRKPRNENKPDWGKHTFGYRQIGEKHLEYLSKR 415
+AT +H +G Y +++P W K + + ++ +++R
Sbjct: 65 TSATISRIHEYQADGN---PGAEEQSGYWLQSVKSEPKWLKLMKNVHILTDAEMKQVARR 121
Query: 416 HSQKFVSGHTFTTLIVPPTKLMAHFHKLFEEAGGRTLQVEVSSLEDPILGEYDVVVNCTG 595
KF G +TT + PT + F + GG+ + ++ +++D + YDV VNCTG
Sbjct: 122 PEHKF--GIFYTTWYLEPTPYIKWCTDKFLKNGGKFKKQKIENIDD-VARSYDVTVNCTG 178
Query: 596 IGARDLVPDNSVFSVKGQV 652
+G+R L+ D V+ +GQ+
Sbjct: 179 LGSRALIGDKEVYPTRGQI 197
>Z81484-2|CAB03970.2| 334|Caenorhabditis elegans Hypothetical
protein C47A10.5 protein.
Length = 334
Score = 46.0 bits (104), Expect = 4e-05
Identities = 44/205 (21%), Positives = 92/205 (44%), Gaps = 6/205 (2%)
Frame = +2
Query: 56 VVGAGINGLTCALRIQEKYKKYRVVLLAKQFTPNTTGDGSAGLWYPFETGNTSSELLCKW 235
++G G+ G + AL++ + RV +L+ + T G AGL+ + N ++
Sbjct: 7 IIGEGVIGCSTALQVAQAVPDARVTVLSDRPFEQTCSFGPAGLFRIDDIANR------EF 60
Query: 236 GTATYEF---LHRLWL--EGGLDVCAVPLSFVYRKPRNENKPDWGKHTFGYRQIGEKHLE 400
G +T+++ LHR + G+ + + + ++ + + +G + +R + ++ +
Sbjct: 61 GKSTFDWFAHLHRTEKGDKTGVKLLSGHIQSDSKERLEQQQKAYGDIVYNFRFLEKREIL 120
Query: 401 YLSKRHSQKFVSGHTFTTLIVPPTKLMAHFHKLFEEAGGRTLQVEVSSLEDPILGEYDVV 580
L S+ + +T K + + + G L +V LE+ YDV+
Sbjct: 121 DLFPNPSEHCIH---YTAFASEGNKYVPYLKFQCQARGVEFLHRKVRDLEELANEGYDVI 177
Query: 581 VNCTGIGARDLV-PDNSVFSVKGQV 652
VNC G+ L D+SV+ ++G V
Sbjct: 178 VNCAGLSGGTLAGDDDSVYPIRGVV 202
>AB275891-1|BAF34314.1| 334|Caenorhabditis elegans D-aspartate
oxidase protein.
Length = 334
Score = 46.0 bits (104), Expect = 4e-05
Identities = 44/205 (21%), Positives = 92/205 (44%), Gaps = 6/205 (2%)
Frame = +2
Query: 56 VVGAGINGLTCALRIQEKYKKYRVVLLAKQFTPNTTGDGSAGLWYPFETGNTSSELLCKW 235
++G G+ G + AL++ + RV +L+ + T G AGL+ + N ++
Sbjct: 7 IIGEGVIGCSTALQVAQAVPDARVTVLSDRPFEQTCSFGPAGLFRIDDIANR------EF 60
Query: 236 GTATYEF---LHRLWL--EGGLDVCAVPLSFVYRKPRNENKPDWGKHTFGYRQIGEKHLE 400
G +T+++ LHR + G+ + + + ++ + + +G + +R + ++ +
Sbjct: 61 GKSTFDWFAHLHRTEKGDKTGVKLLSGHIQSDSKERLEQQQKAYGDIVYNFRFLEKREIL 120
Query: 401 YLSKRHSQKFVSGHTFTTLIVPPTKLMAHFHKLFEEAGGRTLQVEVSSLEDPILGEYDVV 580
L S+ + +T K + + + G L +V LE+ YDV+
Sbjct: 121 DLFPNPSEHCIH---YTAFASEGNKYVPYLKFQCQARGVEFLHRKVRDLEELANEGYDVI 177
Query: 581 VNCTGIGARDLV-PDNSVFSVKGQV 652
VNC G+ L D+SV+ ++G V
Sbjct: 178 VNCAGLSGGTLAGDDDSVYPIRGVV 202
>U53139-13|AAK18939.1| 334|Caenorhabditis elegans Hypothetical
protein F18E3.7a protein.
Length = 334
Score = 40.3 bits (90), Expect = 0.002
Identities = 41/205 (20%), Positives = 88/205 (42%), Gaps = 6/205 (2%)
Frame = +2
Query: 56 VVGAGINGLTCALRIQEKYKKYRVVLLAKQFTPNTTGDGSAGLWYPFETGNTSSELLCKW 235
++G G+ G T AL+I + ++ +L + + G AGL+ NT ++
Sbjct: 10 IIGEGVIGCTSALQISKAIPNAKITVLHDKPFKKSCSAGPAGLFRIDYEENT------EY 63
Query: 236 GTATYEFLHRLWL-----EGGLDVCAVPLSFVYRKPRNENKPDWGKHTFGYRQIGEKHLE 400
G A++ + L+ E G+ + + + + + + +G + +R + ++
Sbjct: 64 GRASFAWFSHLYRTTKGSETGVKLVSGHIQSDNLESLKQQQRAYGDIVYNFRFLDDRERL 123
Query: 401 YLSKRHSQKFVSGHTFTTLIVPPTKLMAHFHKLFEEAGGRTLQVEVSSLEDPILGEYDVV 580
+ S+ + +T K + + L E Q EV+SL+ YDV+
Sbjct: 124 DIFPEPSKHCIH---YTAYASEGNKYVPYLKNLLLEQKIEFKQQEVTSLDAVADAGYDVI 180
Query: 581 VNCTGI-GARDLVPDNSVFSVKGQV 652
VNC G+ G + D++ + ++G +
Sbjct: 181 VNCAGLYGGKLAGDDDTCYPIRGVI 205
>AB275892-1|BAF34315.1| 334|Caenorhabditis elegans D-aspartate
oxidase protein.
Length = 334
Score = 40.3 bits (90), Expect = 0.002
Identities = 41/205 (20%), Positives = 88/205 (42%), Gaps = 6/205 (2%)
Frame = +2
Query: 56 VVGAGINGLTCALRIQEKYKKYRVVLLAKQFTPNTTGDGSAGLWYPFETGNTSSELLCKW 235
++G G+ G T AL+I + ++ +L + + G AGL+ NT ++
Sbjct: 10 IIGEGVIGCTSALQISKAIPNAKITVLHDKPFKKSCSAGPAGLFRIDYEENT------EY 63
Query: 236 GTATYEFLHRLWL-----EGGLDVCAVPLSFVYRKPRNENKPDWGKHTFGYRQIGEKHLE 400
G A++ + L+ E G+ + + + + + + +G + +R + ++
Sbjct: 64 GRASFAWFSHLYRTTKGSETGVKLVSGHIQSDNLESLKQQQRAYGDIVYNFRFLDDRERL 123
Query: 401 YLSKRHSQKFVSGHTFTTLIVPPTKLMAHFHKLFEEAGGRTLQVEVSSLEDPILGEYDVV 580
+ S+ + +T K + + L E Q EV+SL+ YDV+
Sbjct: 124 DIFPEPSKHCIH---YTAYASEGNKYVPYLKNLLLEQKIEFKQQEVTSLDAVADAGYDVI 180
Query: 581 VNCTGI-GARDLVPDNSVFSVKGQV 652
VNC G+ G + D++ + ++G +
Sbjct: 181 VNCAGLYGGKLAGDDDTCYPIRGVI 205
>AF002197-1|AAB53982.1| 383|Caenorhabditis elegans Hypothetical
protein F20H11.5 protein.
Length = 383
Score = 35.9 bits (79), Expect = 0.038
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 13/204 (6%)
Frame = +2
Query: 56 VVGAGINGLTCALRIQEKYKKYRV------VLLAKQFTPNTTGDGSAGLWYPFETGNTSS 217
VVG G+ GL+ A I + +K + + K F AGL + ++G S
Sbjct: 22 VVGEGVIGLSTATAILDLAEKRNIPAPEIHIFHHKPFE-KILSRHIAGL-FRIDSG---S 76
Query: 218 ELLCKWGTATYEFLHRLWLE-GGLDVCAVPLSFVYRKPR---NENKPDWGKHTFGYRQIG 385
E+ K+G T+E L LW E GGL + + + + + +G + YR +
Sbjct: 77 EIDRKYGYDTFEKLATLWREYGGLSGVQLVSGHILSDSKTKLDSQRESYGSLVYNYRDLA 136
Query: 386 EKHL---EYLSKRHSQKFVSGHTFTTLIVPPTKLMAHFHKLFEEAGGRTLQVEVSSLEDP 556
E L L G +T + K G R Q + +LE+
Sbjct: 137 EPELFGPTSLFDLPRNTTTRGIHYTAYTSEGLRFCPFLKKELMTKGVRFTQRRIGNLEE- 195
Query: 557 ILGEYDVVVNCTGIGARDLVPDNS 628
+ E+DVVVN G+ L D++
Sbjct: 196 LGAEFDVVVNSAGLLGGVLAGDDA 219
>AB275893-1|BAF34316.1| 383|Caenorhabditis elegans hypothetical
protein protein.
Length = 383
Score = 35.9 bits (79), Expect = 0.038
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 13/204 (6%)
Frame = +2
Query: 56 VVGAGINGLTCALRIQEKYKKYRV------VLLAKQFTPNTTGDGSAGLWYPFETGNTSS 217
VVG G+ GL+ A I + +K + + K F AGL + ++G S
Sbjct: 22 VVGEGVIGLSTATAILDLAEKRNIPAPEIHIFHHKPFE-KILSRHIAGL-FRIDSG---S 76
Query: 218 ELLCKWGTATYEFLHRLWLE-GGLDVCAVPLSFVYRKPR---NENKPDWGKHTFGYRQIG 385
E+ K+G T+E L LW E GGL + + + + + +G + YR +
Sbjct: 77 EIDRKYGYDTFEKLATLWREYGGLSGVQLVSGHILSDSKTKLDSQRESYGSLVYNYRDLA 136
Query: 386 EKHL---EYLSKRHSQKFVSGHTFTTLIVPPTKLMAHFHKLFEEAGGRTLQVEVSSLEDP 556
E L L G +T + K G R Q + +LE+
Sbjct: 137 EPELFGPTSLFDLPRNTTTRGIHYTAYTSEGLRFCPFLKKELMTKGVRFTQRRIGNLEE- 195
Query: 557 ILGEYDVVVNCTGIGARDLVPDNS 628
+ E+DVVVN G+ L D++
Sbjct: 196 LGAEFDVVVNSAGLLGGVLAGDDA 219
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 639 TENTLLSGTRSLAPIPVQFTTTSYSPKIGSSSEDTST*SVLPPASS 502
T ++ + T + P+PV TTT + ++S TST + LPP +S
Sbjct: 461 TTSSSTTTTTTTTPVPVTSTTTEPTTTTYTTSTSTSTTTTLPPTTS 506
>AC084155-9|AAO25978.1| 423|Caenorhabditis elegans Hypothetical
protein Y45G5AM.9b protein.
Length = 423
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -1
Query: 645 PLTENTLLSGTRSLAPIPVQFTTTSYSPKIGSSSEDTST*SVLPPASSNS 496
P N+ + L P P+Q TTTS S + SS D+S + P SS+S
Sbjct: 318 PRAMNSFFDTSNLLLPTPIQATTTSSSTE---SSHDSSATATNPKTSSSS 364
>AC084155-8|AAG23358.2| 499|Caenorhabditis elegans Hypothetical
protein Y45G5AM.9a protein.
Length = 499
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -1
Query: 645 PLTENTLLSGTRSLAPIPVQFTTTSYSPKIGSSSEDTST*SVLPPASSNS 496
P N+ + L P P+Q TTTS S + SS D+S + P SS+S
Sbjct: 318 PRAMNSFFDTSNLLLPTPIQATTTSSSTE---SSHDSSATATNPKTSSSS 364
>U80446-6|AAB37805.2| 783|Caenorhabditis elegans Hypothetical
protein F56A3.1 protein.
Length = 783
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 284 LDVCAVPLSFVYRKPRNENKPDWGKHTFGYRQIGEKHLEYLSKRHSQKF 430
+D +P+ F Y PR+ T G Q+G+ H+E SK H++ F
Sbjct: 624 IDATHLPIQFFY--PRDVGVTF--DETAGISQLGKTHIEMTSKEHTELF 668
>Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical
protein R13.4 protein.
Length = 803
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 353 PSLAYSRFLASDRRRTMAPHIHPSLPPTTV 264
P+ A S S R+TM P +HP +PP V
Sbjct: 665 PASAGSMLNMSSPRQTMIPGMHPMMPPHDV 694
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 681 VXPKGRIPLVTCPLTENTLLSGTRSLAPIPVQFTTTSYSPKIGSSSEDTST*SVL 517
V PK P V+ P+T+ ++ ++ P P QFT + + K +++ S L
Sbjct: 222 VTPKQATPKVSTPVTKKVVIKTPKTEKPEPKQFTPKTRAGKKAAAAATPQAKSTL 276
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,570,164
Number of Sequences: 27780
Number of extensions: 510494
Number of successful extensions: 1663
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1660
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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