Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_M18
(882 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 25 1.2
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 24 1.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 1.6
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 23 4.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 6.5
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 6.5
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 6.5
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 6.5
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 6.5
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 6.5
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 388 EALGVFEQKAFTEIRIRPYLHNANCSTYKINGTLSQAVR 504
++ G F + +I+ RP N CS +IN Q R
Sbjct: 37 DSQGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCR 75
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 24.2 bits (50), Expect = 1.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 131 LLAKQFTPNTTGDGSAGLWYPFETGNTSSE 220
L KQF NTTG + W + NT+ +
Sbjct: 344 LARKQFQKNTTGLERSRSWSSLDNTNTNDQ 373
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 397 GVFEQKAFTEIRIRPYLHNANCSTYKINGTLSQAVR 504
G F + +I+ RP N CS +IN Q R
Sbjct: 89 GFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCR 124
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.9
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -1
Query: 315 TKDNGTAHTSKPPSNHSRCRNSYVAVPHLHNNSEDVLPVSNGYQRPAEPSPVVFG 151
++D SK P S N+Y + +NN + + N ++ P PV +G
Sbjct: 67 SRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINHIEQIPVPVPVYYG 121
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -1
Query: 315 TKDNGTAHTSKPPSNHSRCRNSYVAVPHLHNNSEDVLPVSNGYQRPAEPSPVVFG 151
++D SK P S N+Y + +NN + + N ++ P PV +G
Sbjct: 67 SRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYG 121
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -1
Query: 315 TKDNGTAHTSKPPSNHSRCRNSYVAVPHLHNNSEDVLPVSNGYQRPAEPSPVVFG 151
++D SK P S N+Y + +NN + + N ++ P PV +G
Sbjct: 67 SRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYG 121
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -1
Query: 315 TKDNGTAHTSKPPSNHSRCRNSYVAVPHLHNNSEDVLPVSNGYQRPAEPSPVVFG 151
++D SK P S N+Y + +NN + + N ++ P PV +G
Sbjct: 67 SRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYG 121
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -1
Query: 315 TKDNGTAHTSKPPSNHSRCRNSYVAVPHLHNNSEDVLPVSNGYQRPAEPSPVVFG 151
++D SK P S N+Y + +NN + + N ++ P PV +G
Sbjct: 67 SRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYG 121
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -1
Query: 315 TKDNGTAHTSKPPSNHSRCRNSYVAVPHLHNNSEDVLPVSNGYQRPAEPSPVVFG 151
++D SK P S N+Y + +NN + + N ++ P PV +G
Sbjct: 67 SRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYG 121
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 53 LVVGAGINGLTCALRIQEKYKKYRV 127
+VVG GI G + I+ YKK+++
Sbjct: 828 IVVGVGIIGGIGLIIIEVAYKKHQI 852
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,054
Number of Sequences: 438
Number of extensions: 6962
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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