Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_M16
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0814 - 20779400-20779487,20779780-20780030,20780528-207808...    29   3.8  
01_06_1087 - 34430521-34430899,34432336-34432806,34432926-344331...    29   3.8  
01_01_0039 + 302332-302471,302981-303509,304345-304389,304572-30...    29   3.8  
01_06_0113 - 26569803-26569874,26570032-26570111,26570712-26571258     29   6.6  

>10_08_0814 -
           20779400-20779487,20779780-20780030,20780528-20780812,
           20781563-20782008,20782095-20782485
          Length = 486

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 400 STKRL-SSPQLHSIIRPRTSSDNQPATSSGNQPSS 501
           STKR  S+ +L S+ RPR SS   PA+ S   PS+
Sbjct: 22  STKRTRSARRLPSLTRPRASSSPSPASPSPPPPSA 56


>01_06_1087 -
           34430521-34430899,34432336-34432806,34432926-34433112,
           34433470-34433599,34433794-34434125,34434566-34435050,
           34435185-34435752,34436579-34436640,34437569-34437636
          Length = 893

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -2

Query: 487 CPTRLQAGCRMTXEGGLSNE-VEGWTISS-WTAASLD 383
           CPT L A C  + E G SN+ V+G+ + + W A  L+
Sbjct: 831 CPTGLPAACSGSGEAGESNKGVDGYCLGAVWVAPRLE 867


>01_01_0039 +
           302332-302471,302981-303509,304345-304389,304572-304718,
           304834-304899,304993-305058,305171-305257
          Length = 359

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +1

Query: 361 LNLKWSRSPVMQQSTKRLSSPQLHSI 438
           LN +WS+ P++  ST +LSS +L S+
Sbjct: 37  LNHQWSQPPMLSSSTDQLSSYELESL 62


>01_06_0113 - 26569803-26569874,26570032-26570111,26570712-26571258
          Length = 232

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -2

Query: 418 WTISSWTAASLDSCSISD*GSEWSLISNPSYFDLTE 311
           WTI  WT A ++  +I     +W  IS P YFDLT+
Sbjct: 197 WTIVGWTNARINRMTI-----QW--ISLPLYFDLTK 225


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,341,541
Number of Sequences: 37544
Number of extensions: 376337
Number of successful extensions: 956
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)