Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_M15
(853 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 34 0.002
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 1.5
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 1.5
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 2.0
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.7
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 4.7
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 4.7
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 4.7
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.2
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 8.2
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 33.9 bits (74), Expect = 0.002
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 281 AVVTGGTDGIGKHYAKELARRGLNVVIISRNPEKLKATVTEIEKE 415
A+VTG GIGK + L +G+ V+ I+ +K+K V E++ +
Sbjct: 10 ALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSK 54
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +2
Query: 188 LWSPLXLVSSYL---MPYFLPAEDQPLTKKFGSW 280
+W P + S+ + YF P ++Q KFGSW
Sbjct: 134 VWKPPAIYKSFCEIDVEYF-PFDEQTCFMKFGSW 166
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 24.2 bits (50), Expect = 1.5
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 257 AADPR--RAGSTASNKTKPTXKDSTASPEQSTTQPTNRLQL 141
A+ PR A +T+S T P STA+ + P+N ++L
Sbjct: 824 ASSPRYLSAAATSSTSTSPRPASSTAATLVLSGCPSNMMEL 864
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.8 bits (49), Expect = 2.0
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +2
Query: 182 DSLWSPLXLVSSYL---MPYFLPAEDQPLTKKFGSW 280
D LW P + S + YF P + Q KFGSW
Sbjct: 138 DVLWVPPAIYQSSCTIDVTYF-PFDQQTCIMKFGSW 172
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 3.6
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +2
Query: 182 DSLWSPLXLVSSYL---MPYFLPAEDQPLTKKFGSW 280
D W P + S + YF P ++Q KFGSW
Sbjct: 145 DVSWKPPAIYKSSCEINVEYF-PFDEQSCIMKFGSW 179
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 233 FLPAEDQPLTKKFGSW 280
+ P +DQ KFGSW
Sbjct: 117 WFPFDDQHCDMKFGSW 132
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 233 FLPAEDQPLTKKFGSW 280
+ P +DQ KFGSW
Sbjct: 117 WFPFDDQHCDMKFGSW 132
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 233 FLPAEDQPLTKKFGSW 280
+ P +DQ KFGSW
Sbjct: 117 WFPFDDQHCDMKFGSW 132
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 233 FLPAEDQPLTKKFGSW 280
+ P +DQ KFGSW
Sbjct: 117 WFPFDDQHCDMKFGSW 132
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 233 FLPAEDQPLTKKFGSW 280
+ P +DQ KFGSW
Sbjct: 117 WFPFDDQHCDMKFGSW 132
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 233 FLPAEDQPLTKKFGSW 280
+ P +DQ KFGSW
Sbjct: 117 WFPFDDQHCDMKFGSW 132
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 233 FLPAEDQPLTKKFGSW 280
+ P +DQ KFGSW
Sbjct: 185 WFPFDDQHCDMKFGSW 200
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 233 FLPAEDQPLTKKFGSW 280
+ P +DQ KFGSW
Sbjct: 185 WFPFDDQHCDMKFGSW 200
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 233 FLPAEDQPLTKKFGSW 280
+ P ++Q KFGSW
Sbjct: 155 YFPFDEQTCVMKFGSW 170
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.6 bits (46), Expect = 4.7
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +2
Query: 188 LWSPLXLVSSYL---MPYFLPAEDQPLTKKFGSW 280
LW+P + S + YF P + Q KFGSW
Sbjct: 134 LWTPPAIFKSSCEIDVRYF-PFDQQTCFMKFGSW 166
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 233 FLPAEDQPLTKKFGSW 280
+ P +DQ KFGSW
Sbjct: 154 WFPFDDQRCEMKFGSW 169
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 6.2
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 233 FLPAEDQPLTKKFGSW 280
+ P ++Q KFGSW
Sbjct: 159 YFPFDEQTCVLKFGSW 174
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.8 bits (44), Expect = 8.2
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 244 GGQEVRHQIRRNQ--L*RTPQRVQSNRQHSQQ 155
GG E HQ +++ + PQ+ QS +Q SQQ
Sbjct: 16 GGVEHPHQHQQHYGAAVQVPQQTQSVQQQSQQ 47
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,467
Number of Sequences: 438
Number of extensions: 4799
Number of successful extensions: 26
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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