Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_M13
         (1056 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   2.2  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   5.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   6.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 2.2
 Identities = 17/64 (26%), Positives = 17/64 (26%)
 Frame = -2

Query: 722 GGGAXXGVGXGRRXXXRXXXXXXXXXXXXXXGVXXXGFAGGGXPPXXRGGGXAXXXXXGG 543
           GGG   G G G                         G   GG  P   GG        GG
Sbjct: 168 GGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGG 227

Query: 542 GGXG 531
           GG G
Sbjct: 228 GGGG 231


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 5.0
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 540 PPTXXXPTRXPXPPGXXGGPP 602
           PPT   P R    PG  G PP
Sbjct: 80  PPTMNMPPRPGMIPGMPGAPP 100


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 6.6
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -2

Query: 614 GFAGGGXPPXXRGGGXAXXXXXGGGG 537
           G  GG       GGG A     GGGG
Sbjct: 681 GAGGGAGSSGGSGGGLASGSPYGGGG 706


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.145    0.496 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,994
Number of Sequences: 2352
Number of extensions: 8335
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 117574314
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)