Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_M13
(1056 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 41 0.001
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 41 0.001
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 41 0.001
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.20
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.20
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 34 0.20
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.45
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.45
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.45
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.60
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 31 1.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.0
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 30 2.4
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 30 2.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 3.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 3.2
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 7.4
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 7.4
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 7.4
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 7.4
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 28 9.7
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 28 9.7
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 9.7
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/110 (24%), Positives = 30/110 (27%), Gaps = 1/110 (0%)
Frame = +1
Query: 541 PPPXXXXXAXPPPRXXGGXPPPA-KPXXXTXXXXXXXXXXXXXXXRXXXRRPXPTPXXAP 717
PPP + PPPR PPP P R PT P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 718 PPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPPXGXPPXPXP 867
P PP + P R P +PP G PP P
Sbjct: 315 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 364
Score = 32.3 bits (70), Expect = 0.60
Identities = 28/127 (22%), Positives = 33/127 (25%), Gaps = 4/127 (3%)
Frame = +1
Query: 673 RXXXRRPXPTPXXAPPPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPP---- 840
R + P PPP PP P R P P +PP
Sbjct: 226 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA 285
Query: 841 XGXPPXPXPXXXXXRXPXAXTNPXKTTXPPRXXPXXXXXTXGXXXXAHTPRADXQXPTLH 1020
G PP P P + P + PP+ G PR Q P
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ--AGGSPPPAGTGSPPPPPRQKRQAPERS 343
Query: 1021 XXXSXPP 1041
PP
Sbjct: 344 PPTGSPP 350
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 274 PPFGXGRXPRGXPXPPRXGXXPPPGGXXXP 185
PP G P G PP+ G PPP G P
Sbjct: 300 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 329
Score = 30.7 bits (66), Expect = 1.8
Identities = 24/97 (24%), Positives = 25/97 (25%), Gaps = 1/97 (1%)
Frame = +3
Query: 327 PTXGKXKKPPXPQX-PPXXXXXXXXXXXXXSXPXKKRGAXXGXGXXXXGXAXPXPGXADT 503
P G PP P+ PP P R G P P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG--SPPPPPTGSPPPPPAGGSP 289
Query: 504 XXRXXGXXXPXSPPTXXXPTRXPXPPGXXGGPPXRET 614
G P PP PT PP G PP T
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 326
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Frame = -3
Query: 286 GSXXPPFGXGRXP---RGXPXPPRXGXXPPP--GGXXXP 185
GS PP G P G P PP G PPP GG P
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/110 (24%), Positives = 30/110 (27%), Gaps = 1/110 (0%)
Frame = +1
Query: 541 PPPXXXXXAXPPPRXXGGXPPPA-KPXXXTXXXXXXXXXXXXXXXRXXXRRPXPTPXXAP 717
PPP + PPPR PPP P R PT P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 718 PPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPPXGXPPXPXP 867
P PP + P R P +PP G PP P
Sbjct: 336 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 385
Score = 32.3 bits (70), Expect = 0.60
Identities = 28/127 (22%), Positives = 33/127 (25%), Gaps = 4/127 (3%)
Frame = +1
Query: 673 RXXXRRPXPTPXXAPPPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPP---- 840
R + P PPP PP P R P P +PP
Sbjct: 247 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA 306
Query: 841 XGXPPXPXPXXXXXRXPXAXTNPXKTTXPPRXXPXXXXXTXGXXXXAHTPRADXQXPTLH 1020
G PP P P + P + PP+ G PR Q P
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ--AGGSPPPAGTGSPPPPPRQKRQAPERS 364
Query: 1021 XXXSXPP 1041
PP
Sbjct: 365 PPTGSPP 371
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 274 PPFGXGRXPRGXPXPPRXGXXPPPGGXXXP 185
PP G P G PP+ G PPP G P
Sbjct: 321 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 350
Score = 30.7 bits (66), Expect = 1.8
Identities = 24/97 (24%), Positives = 25/97 (25%), Gaps = 1/97 (1%)
Frame = +3
Query: 327 PTXGKXKKPPXPQX-PPXXXXXXXXXXXXXSXPXKKRGAXXGXGXXXXGXAXPXPGXADT 503
P G PP P+ PP P R G P P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG--SPPPPPTGSPPPPPAGGSP 310
Query: 504 XXRXXGXXXPXSPPTXXXPTRXPXPPGXXGGPPXRET 614
G P PP PT PP G PP T
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 347
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Frame = -3
Query: 286 GSXXPPFGXGRXP---RGXPXPPRXGXXPPP--GGXXXP 185
GS PP G P G P PP G PPP GG P
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/110 (24%), Positives = 30/110 (27%), Gaps = 1/110 (0%)
Frame = +1
Query: 541 PPPXXXXXAXPPPRXXGGXPPPA-KPXXXTXXXXXXXXXXXXXXXRXXXRRPXPTPXXAP 717
PPP + PPPR PPP P R PT P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 718 PPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPPXGXPPXPXP 867
P PP + P R P +PP G PP P
Sbjct: 321 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 370
Score = 32.3 bits (70), Expect = 0.60
Identities = 28/127 (22%), Positives = 33/127 (25%), Gaps = 4/127 (3%)
Frame = +1
Query: 673 RXXXRRPXPTPXXAPPPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPP---- 840
R + P PPP PP P R P P +PP
Sbjct: 232 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA 291
Query: 841 XGXPPXPXPXXXXXRXPXAXTNPXKTTXPPRXXPXXXXXTXGXXXXAHTPRADXQXPTLH 1020
G PP P P + P + PP+ G PR Q P
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ--AGGSPPPAGTGSPPPPPRQKRQAPERS 349
Query: 1021 XXXSXPP 1041
PP
Sbjct: 350 PPTGSPP 356
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 274 PPFGXGRXPRGXPXPPRXGXXPPPGGXXXP 185
PP G P G PP+ G PPP G P
Sbjct: 306 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 335
Score = 30.7 bits (66), Expect = 1.8
Identities = 24/97 (24%), Positives = 25/97 (25%), Gaps = 1/97 (1%)
Frame = +3
Query: 327 PTXGKXKKPPXPQX-PPXXXXXXXXXXXXXSXPXKKRGAXXGXGXXXXGXAXPXPGXADT 503
P G PP P+ PP P R G P P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG--SPPPPPTGSPPPPPAGGSP 295
Query: 504 XXRXXGXXXPXSPPTXXXPTRXPXPPGXXGGPPXRET 614
G P PP PT PP G PP T
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 332
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Frame = -3
Query: 286 GSXXPPFGXGRXP---RGXPXPPRXGXXPPP--GGXXXP 185
GS PP G P G P PP G PPP GG P
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 34.3 bits (75), Expect = 0.15
Identities = 37/134 (27%), Positives = 39/134 (29%), Gaps = 4/134 (2%)
Frame = -2
Query: 920 VVFXGLVXAXGXLFXXXXGXGXGGXPXGGASXGXGXXSXXLXGVXXARXGGXXXXXXXXX 741
++ GL A LF G G GG GG G G G GG
Sbjct: 7 ILLLGLSVATAFLFPSGGGGGGGGGCGGGCGGGGGCGGGGGCG------GGCAPPPPPPA 60
Query: 740 XXXGXXGGGAXXGVGXGRRXXXRXXXXXXXXXXXXXXGVXXXGFAGGG----XPPXXRGG 573
G GGG G G G G G GGG PP GG
Sbjct: 61 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGG 120
Query: 572 GXAXXXXXGGGGXG 531
G GGG G
Sbjct: 121 GCGGGGGGCGGGCG 134
Score = 29.1 bits (62), Expect = 5.6
Identities = 30/116 (25%), Positives = 30/116 (25%), Gaps = 4/116 (3%)
Frame = -2
Query: 866 GXGXGGXPXGGASXGXGXXSXX----LXGVXXARXGGXXXXXXXXXXXXGXXGGGAXXGV 699
G G GG GG G G G GG G GGG G
Sbjct: 35 GCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGG 94
Query: 698 GXGRRXXXRXXXXXXXXXXXXXXGVXXXGFAGGGXPPXXRGGGXAXXXXXGGGGXG 531
G G G GGG GGG GGGG G
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCG 150
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.20
Identities = 29/115 (25%), Positives = 29/115 (25%), Gaps = 3/115 (2%)
Frame = +1
Query: 532 PXPPPPXXXXXAXPPPRXXGGXPPPAKPXXXTXXXXXXXXXXXXXXXRXXXRRPXPTPXX 711
P PP P PPP PPP P T R P
Sbjct: 276 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP---PPSRFGPPGMGG 332
Query: 712 APPPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPPXG---XPPXPXP 867
PPP PP P P APP G PP P P
Sbjct: 333 MPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 29.9 bits (64), Expect = 3.2
Identities = 26/113 (23%), Positives = 26/113 (23%), Gaps = 3/113 (2%)
Frame = +1
Query: 532 PXPPPPXXXXXAXPP-PRXXG--GXPPPAKPXXXTXXXXXXXXXXXXXXXRXXXRRPXPT 702
P PPPP PP P G PPP P P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Query: 703 PXXAPPPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPPXGXPPXP 861
P PP P P R P PP PP P
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 374
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 540 PPTXXXPTRXPXPPGXXGGPP 602
PP P R P PPG G PP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPP 318
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.20
Identities = 29/115 (25%), Positives = 29/115 (25%), Gaps = 3/115 (2%)
Frame = +1
Query: 532 PXPPPPXXXXXAXPPPRXXGGXPPPAKPXXXTXXXXXXXXXXXXXXXRXXXRRPXPTPXX 711
P PP P PPP PPP P T R P
Sbjct: 286 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP---PPSRFGPPGMGG 342
Query: 712 APPPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPPXG---XPPXPXP 867
PPP PP P P APP G PP P P
Sbjct: 343 MPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 29.9 bits (64), Expect = 3.2
Identities = 26/113 (23%), Positives = 26/113 (23%), Gaps = 3/113 (2%)
Frame = +1
Query: 532 PXPPPPXXXXXAXPP-PRXXG--GXPPPAKPXXXTXXXXXXXXXXXXXXXRXXXRRPXPT 702
P PPPP PP P G PPP P P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Query: 703 PXXAPPPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPPXGXPPXP 861
P PP P P R P PP PP P
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 384
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 540 PPTXXXPTRXPXPPGXXGGPP 602
PP P R P PPG G PP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPP 328
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 33.9 bits (74), Expect = 0.20
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = +1
Query: 691 PXPTPXXAP---PPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPPXGXPPXP 861
P PTP AP P PP A P P P +AP P
Sbjct: 351 PAPTPAPAPAEDPVVTPAPEELTTPPPPAPPPPAPAVPEEAQAPTPAPEEAPEAQIPAET 410
Query: 862 XPXXXXXRXPXAXTNPXKTTXPP 930
P A P TT PP
Sbjct: 411 AQIPPENAVPEAPEEPAPTTTPP 433
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.45
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 538 PPPPXXXXXAXPPPRXXGGXPPP 606
PPPP PPP GG PPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPP 97
Score = 32.3 bits (70), Expect = 0.60
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 538 PPPPXXXXXAXPPPRXXGGXPPP 606
PPPP PPP GG PPP
Sbjct: 85 PPPPMFAGGIPPPPPMMGGIPPP 107
Score = 31.9 bits (69), Expect = 0.79
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 538 PPPPXXXXXAXPPPRXXGGXPPPAKP 615
PPPP PPP G PPP P
Sbjct: 95 PPPPPMMGGIPPPPPMFGAPPPPPPP 120
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.45
Identities = 30/112 (26%), Positives = 30/112 (26%)
Frame = -2
Query: 866 GXGXGGXPXGGASXGXGXXSXXLXGVXXARXGGXXXXXXXXXXXXGXXGGGAXXGVGXGR 687
G G GG GG G G G GG G GGG G G G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGS 143
Query: 686 RXXXRXXXXXXXXXXXXXXGVXXXGFAGGGXPPXXRGGGXAXXXXXGGGGXG 531
G GGG GGG GGGG G
Sbjct: 144 SGGCGGGSSGGCGGGGGG---GCGGGGGGGCGGGSSGGGGYAVAPSGGGGCG 192
Score = 28.7 bits (61), Expect = 7.4
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = -2
Query: 614 GFAGGGXPPXXRGGGXAXXXXXGGGGXGXXXXXXXXXRVXXPXXRXGXPPXXPXXPXXGP 435
G +GGG GGG A GGG G P PP P P P
Sbjct: 258 GSSGGGYSTGG-GGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAP 316
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.45
Identities = 30/112 (26%), Positives = 30/112 (26%)
Frame = -2
Query: 866 GXGXGGXPXGGASXGXGXXSXXLXGVXXARXGGXXXXXXXXXXXXGXXGGGAXXGVGXGR 687
G G GG GG G G G GG G GGG G G G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGS 143
Query: 686 RXXXRXXXXXXXXXXXXXXGVXXXGFAGGGXPPXXRGGGXAXXXXXGGGGXG 531
G GGG GGG GGGG G
Sbjct: 144 SGGCGGGSSGGCGGGGGG---GCGGGGGGGCGGGSSGGGGYAVAPSGGGGCG 192
Score = 28.7 bits (61), Expect = 7.4
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = -2
Query: 614 GFAGGGXPPXXRGGGXAXXXXXGGGGXGXXXXXXXXXRVXXPXXRXGXPPXXPXXPXXGP 435
G +GGG GGG A GGG G P PP P P P
Sbjct: 258 GSSGGGYSTGG-GGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAP 316
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 32.3 bits (70), Expect = 0.60
Identities = 31/112 (27%), Positives = 31/112 (27%)
Frame = -2
Query: 866 GXGXGGXPXGGASXGXGXXSXXLXGVXXARXGGXXXXXXXXXXXXGXXGGGAXXGVGXGR 687
G G GG GG G G G GG G GGG G G G
Sbjct: 111 GGGYGGGGYGGGGDGGGGYGGY-GGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGG 169
Query: 686 RXXXRXXXXXXXXXXXXXXGVXXXGFAGGGXPPXXRGGGXAXXXXXGGGGXG 531
G G GGG GGG GGGG G
Sbjct: 170 MGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDG 221
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 180 PXGXXXPPGGGXXPXRGGXGXPRGXRPXPKG 272
P G PPGG P G G PRG P P G
Sbjct: 157 PKGPPGPPGGHGEPGPAGRGGPRGP-PGPGG 186
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 198 PPGGGXXPXRGGXGXPRGXRPXPKGG 275
PP GG P GG RG P P+GG
Sbjct: 1554 PPMGGLPPPHGGMNGWRGGPPPPRGG 1579
Score = 28.7 bits (61), Expect = 7.4
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +3
Query: 165 EXKXXPXGXXXPPGGGXXPXRGGXGXPRGXR----PXPKGGXXXPK 290
+ + P G PP GG RGG PRG P P G P+
Sbjct: 1550 QNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPR 1595
Score = 28.7 bits (61), Expect = 7.4
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +1
Query: 439 PXXGXXGXXGGXPXRXXGKXTRXXXXXXXXXPXPPPPXXXXXAXPPPRXXGGXPPPA 609
P G G GG P G + PPP PP GG PPP+
Sbjct: 1562 PHGGMNGWRGGPPPPRGGSHCQGPPPLMGG----PPPRLGMPPPGPPPPNGGPPPPS 1614
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 286 GSXXPPFGXGRXPRGXPXPPRXGXXPPPGG 197
G PP G RG P P R G P GG
Sbjct: 1466 GGPPPPRGMNSPMRGMPPPMRGGGPPMRGG 1495
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = -3
Query: 289 LGSXXPPFGXGRXPRGXPXPPRXG---XXPPP 203
+G PP G RG P PPR G PPP
Sbjct: 1556 MGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPP 1587
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 538 PPPPXXXXXAXPPPRXXGGXPPP 606
PPPP PPR GG PPP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPP 792
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 538 PPPPXXXXXAXPPPRXXGGXPPP 606
PPPP PPR GG PPP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPP 792
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/88 (26%), Positives = 23/88 (26%)
Frame = +1
Query: 352 PXPPXLPXXRXXXXXXXXXXXXXPXKKGGPXXGXXGXXGGXPXRXXGKXTRXXXXXXXXX 531
P PP LP P G P G G P G
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG---GLPPISGGPPPPPPPPGGCPP 770
Query: 532 PXPPPPXXXXXAXPPPRXXGGXPPPAKP 615
P PPPP PPP G P P
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/88 (26%), Positives = 23/88 (26%)
Frame = +1
Query: 352 PXPPXLPXXRXXXXXXXXXXXXXPXKKGGPXXGXXGXXGGXPXRXXGKXTRXXXXXXXXX 531
P PP LP P G P G G P G
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG---GLPPISGGPPPPPPPPGGCPP 770
Query: 532 PXPPPPXXXXXAXPPPRXXGGXPPPAKP 615
P PPPP PPP G P P
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/88 (26%), Positives = 23/88 (26%)
Frame = +1
Query: 352 PXPPXLPXXRXXXXXXXXXXXXXPXKKGGPXXGXXGXXGGXPXRXXGKXTRXXXXXXXXX 531
P PP LP P G P G G P G
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG---GLPPISGGPPPPPPPPGGCPP 353
Query: 532 PXPPPPXXXXXAXPPPRXXGGXPPPAKP 615
P PPPP PPP G P P
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Frame = +1
Query: 691 PXPTPXXAPPPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPP-XGXPPXPXP 867
P P PPP PP P P P PP G PP P P
Sbjct: 535 PPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
Query: 868 XXXXXRXPXAXTNPXKT 918
P +N KT
Sbjct: 595 PPGGLMGP--ASNDAKT 609
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 6/34 (17%)
Frame = +1
Query: 532 PXPPPPXXXXXAX------PPPRXXGGXPPPAKP 615
P PPPP + PPP GG PPP P
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 532 PXPPPPXXXXXAXPPPRXXGGXPPPA 609
P PPPP PPP GG PA
Sbjct: 578 PPPPPPPMLGGPPPPPPPPGGLMGPA 603
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +1
Query: 532 PXPPPPXXXXXAXPPPRXXGGXPPPAKPXXXTXXXXXXXXXXXXXXXRXXXRRPXPTPXX 711
P PPPP PPPR PPP +P R P+P
Sbjct: 138 PPPPPPPRVPRT-PPPR----SPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIP 192
Query: 712 APPP 723
PPP
Sbjct: 193 PPPP 196
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +1
Query: 769 PPXRAXXTPXRXXEXXPXPXDAPPXGXPPXPXPXXXXXRXPXAXTNPXKTTXPP 930
PP A P P P +AP P P A P TT PP
Sbjct: 392 PPPPAPAVPEEAQAPTPAPEEAPEAQIPAETAQIPPENAVPEAPEEPAPTTTPP 445
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 30.3 bits (65), Expect = 2.4
Identities = 20/85 (23%), Positives = 22/85 (25%), Gaps = 1/85 (1%)
Frame = +1
Query: 691 PXPTPXXAPPPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPPXGXPPXPXPX 870
P P P P P P + P E P P P P P P
Sbjct: 163 PKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPK 222
Query: 871 XXXXRXPXAXTNPXKTTXP-PRXXP 942
P NP P P+ P
Sbjct: 223 PKPKPKPKPKPNPNPKPEPKPKPKP 247
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/86 (22%), Positives = 23/86 (26%), Gaps = 1/86 (1%)
Frame = +1
Query: 688 RPXPTPXXAPPPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPPXGXPPXPXP 867
+P P P P P P + P + P P P P P P
Sbjct: 164 KPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKP 223
Query: 868 XXXXXRXPXAXTNPXKTTXP-PRXXP 942
P NP P P+ P
Sbjct: 224 KPKPKPKPKPNPNPKPEPKPKPKPKP 249
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 532 PXPPPPXXXXXAXPPPRXXGGXPPPAKP 615
P PPPP PPP PPP P
Sbjct: 44 PCPPPPICPPQFCPPPPMCPPPPPPPPP 71
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = -3
Query: 286 GSXXPPFGXGRXP-RGXPXPPRXG--XXPPP 203
G+ PPFG G P P PPR G PPP
Sbjct: 754 GAPPPPFGRGAGPMSSFPPPPRGGMHHMPPP 784
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.7 bits (61), Expect = 7.4
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Frame = -3
Query: 598 GPPXXPGGXGXRVGXLXVGGDXGXXXPXXRXXVSAXPG----XGXAXPXXSXPSPXXAP 434
GPP PGG G +G GG+ G P + G G A S PSP P
Sbjct: 154 GPPGPPGGPG-ELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQP 211
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.7 bits (61), Expect = 7.4
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Frame = -3
Query: 598 GPPXXPGGXGXRVGXLXVGGDXGXXXPXXRXXVSAXPG----XGXAXPXXSXPSPXXAP 434
GPP PGG G +G GG+ G P + G G A S PSP P
Sbjct: 154 GPPGPPGGPG-ELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQP 211
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 532 PXPPPPXXXXXAXPPPRXXGGXPPP 606
P PPPP PPP PPP
Sbjct: 252 PPPPPPCPMPIPCPPPPPACSCPPP 276
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 7.4
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -2
Query: 719 GGAXXGVGXGRRXXXRXXXXXXXXXXXXXXGVXXXGFAGGGXPPXXRGGGXAXXXXXGGG 540
GG G G GR G G GGG RGGG GGG
Sbjct: 58 GGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGG 117
Query: 539 GXG 531
G G
Sbjct: 118 GGG 120
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.4
Identities = 20/85 (23%), Positives = 23/85 (27%)
Frame = +1
Query: 688 RPXPTPXXAPPPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPPXGXPPXPXP 867
RP +P PPP PP P P P + P G P
Sbjct: 68 RPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLYSEK 127
Query: 868 XXXXXRXPXAXTNPXKTTXPPRXXP 942
P +P K PP P
Sbjct: 128 QHQQQLRPTTAVSPPK---PPSFAP 149
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.7 bits (61), Expect = 7.4
Identities = 20/85 (23%), Positives = 23/85 (27%)
Frame = +1
Query: 688 RPXPTPXXAPPPXXXXXXXXXXXXXXXPPXRAXXTPXRXXEXXPXPXDAPPXGXPPXPXP 867
RP +P PPP PP P P P + P G P
Sbjct: 290 RPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLYSEK 349
Query: 868 XXXXXRXPXAXTNPXKTTXPPRXXP 942
P +P K PP P
Sbjct: 350 QHQQQLRPTTAVSPPK---PPSFAP 371
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +3
Query: 180 PXGXXXPPGGGXXPXRGGXGXP-RGXRPXPKGGXXXPK 290
P G PP G +GG G P +G P P G P+
Sbjct: 43 PGGGGQPPYPGSNSNQGGGGYPGQGGAPYPGGSGGYPQ 80
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +3
Query: 180 PXGXXXPPGGGXXPXRGGXGXP-RGXRPXPKGGXXXPK 290
P G PP G +GG G P +G P P G P+
Sbjct: 85 PGGGGQPPYPGSNSNQGGGGYPGQGGAPYPGGSGGYPQ 122
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +3
Query: 186 GXXXPPGGGXXPXRGGXGXPRG--XRPXPKGGXXXP 287
G PPGG P GG G G RP P G P
Sbjct: 172 GPPGPPGGPGGPGEGGDGGRPGNPGRPGPAGPRGEP 207
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.3 bits (60), Expect = 9.7
Identities = 30/117 (25%), Positives = 32/117 (27%), Gaps = 5/117 (4%)
Frame = -2
Query: 866 GXGXGGXPXGGASXGXGXXSXXLXGVXXARXGGXXXXXXXXXXXXGXXGGGAXXGVGXGR 687
G G GG GG G G G GG G GGG G G G
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGN 112
Query: 686 RXXXRXXXXXXXXXXXXXXGVXXXGFAGGGXPPXXRGGG-----XAXXXXXGGGGXG 531
+ + G GGG GGG GGGG G
Sbjct: 113 QGGGGGGGFNFNDIGGLINSMGGGG--GGGQRQGGGGGGFGDILGGIGSLIGGGGGG 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.145 0.496
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,053,695
Number of Sequences: 27780
Number of extensions: 271558
Number of successful extensions: 2176
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1653
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2814342022
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -