Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_M12
(880 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 462 e-129
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 450 e-125
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 234 e-118
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 398 e-110
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 344 2e-93
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 239 4e-93
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 301 1e-80
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 299 6e-80
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 299 6e-80
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 291 1e-77
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 281 2e-74
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 188 1e-46
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 149 9e-35
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 141 2e-32
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 141 2e-32
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 133 6e-30
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 128 1e-28
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 122 9e-27
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 122 2e-26
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 118 1e-25
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 116 6e-25
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 115 1e-24
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 113 4e-24
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 112 1e-23
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 108 2e-22
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 106 6e-22
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 105 1e-21
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 104 3e-21
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 103 5e-21
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 95 2e-18
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 93 1e-17
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 88 3e-16
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 87 4e-16
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 84 4e-15
UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransfera... 42 0.021
UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108, w... 40 0.063
UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.25
UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_030005... 38 0.44
UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN full-... 37 0.59
UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.59
UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: L... 36 1.0
UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=... 36 1.0
UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_Q4QD98 Cluster: Putative uncharacterized protein; n=3; ... 36 1.0
UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_Q7U147 Cluster: PROBABLE OXIDASE; n=7; Mycobacterium tu... 35 2.4
UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacill... 35 3.1
UniRef50_A0TIV4 Cluster: Putative uncharacterized protein; n=2; ... 35 3.1
UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1; ... 35 3.1
UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1... 34 4.1
UniRef50_UPI00005A603F Cluster: PREDICTED: hypothetical protein ... 34 4.1
UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: V... 34 4.1
UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4... 34 4.1
UniRef50_Q0S5H2 Cluster: Undecaprenyl-phosphate galactose phosph... 34 4.1
UniRef50_A7CME0 Cluster: Putative uncharacterized protein precur... 34 4.1
UniRef50_A5P378 Cluster: Putative uncharacterized protein; n=3; ... 34 4.1
UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_Q9P557 Cluster: Related to merozoite surface antigen 2;... 34 4.1
UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family prote... 34 5.5
UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular ... 34 5.5
UniRef50_Q4S9F1 Cluster: Chromosome undetermined SCAF14697, whol... 33 7.2
UniRef50_A6E8K7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis t... 33 7.2
UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p... 33 7.2
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 33 9.6
UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1; Psychroba... 33 9.6
UniRef50_Q01J77 Cluster: OSIGBa0152K17.10 protein; n=5; Oryza sa... 33 9.6
UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2; ... 33 9.6
UniRef50_Q4XGP3 Cluster: Pc-fam-3 protein putative; n=1; Plasmod... 33 9.6
UniRef50_P83183 Cluster: Cysteine-rich protamine; n=1; Eledone c... 33 9.6
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 462 bits (1138), Expect = e-129
Identities = 211/259 (81%), Positives = 234/259 (90%)
Frame = +2
Query: 74 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 253
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 254 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 433
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 434 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 613
YKLCKVK+ G K VP+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF+SGNL
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 614 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 793
CMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K YISLP+
Sbjct: 181 CMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPK 240
Query: 794 GKGIRLTIAEERDKRIAXK 850
GKG++L+IAEERDKR+A K
Sbjct: 241 GKGVKLSIAEERDKRLAAK 259
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 450 bits (1108), Expect = e-125
Identities = 201/259 (77%), Positives = 232/259 (89%)
Frame = +2
Query: 74 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 253
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 254 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 433
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 434 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 613
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 614 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 793
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K +ISLPR
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR 240
Query: 794 GKGIRLTIAEERDKRIAXK 850
GKGIRLTIAEERDKR+A K
Sbjct: 241 GKGIRLTIAEERDKRLAAK 259
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 234 bits (572), Expect(2) = e-118
Identities = 99/140 (70%), Positives = 125/140 (89%)
Frame = +2
Query: 431 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 610
+YKLCKVK++ G K +P+LVTHD RTIRYPDPLIKVND++++D+ T KI DFIKF++ N
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSN 211
Query: 611 LCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 790
+CM+TGG NLGR+G I +RERHPGSFD+VH+KDSTG++FATRL+N+F+IGKG K ++SLP
Sbjct: 212 MCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLP 271
Query: 791 RGKGIRLTIAEERDKRIAXK 850
RGKGIRLTIAEERDKR+A K
Sbjct: 272 RGKGIRLTIAEERDKRLAAK 291
Score = 215 bits (525), Expect(2) = e-118
Identities = 99/119 (83%), Positives = 107/119 (89%)
Frame = +2
Query: 77 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 256
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 257 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 433
KI QR IK+DGKVRTD TYP GFMDV+SI+KT E FRLIYDVKGRFT+HRIT EEAK
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 398 bits (981), Expect = e-110
Identities = 183/262 (69%), Positives = 218/262 (83%)
Frame = +2
Query: 74 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 253
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPLV+ +RNRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 254 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 433
V+ I+ QR I+VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 434 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 613
+KLCKV+ + G K +PYL T+DGRTIRYPDPLIK ND+I+LD+ KI++FIKF+ GN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180
Query: 614 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 793
M+TGGRN GRVG I +RE+H GSF+ +HI+DSTGH FATRL NV+ IGKGTK ++SLP+
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240
Query: 794 GKGIRLTIAEERDKRIAXKVAA 859
GKGI+LTI EE KR+A + AA
Sbjct: 241 GKGIKLTIIEEARKRLASQQAA 262
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 344 bits (845), Expect = 2e-93
Identities = 152/256 (59%), Positives = 198/256 (77%)
Frame = +2
Query: 74 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 253
MARGP+ HLKRLNAP WML KLGG +AP+PS GPH ++ECLPL++ LRNRL YAL G E
Sbjct: 1 MARGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGRE 60
Query: 254 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 433
V IVK R IK+DGK+RTD YP GFMDV+SI +T E FRL+Y+ K RF + +T E+AK
Sbjct: 61 VTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 120
Query: 434 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 613
+KLCK+++ G +PY+VTHDGRTIRYP P ++ ND+I+L++ T KI+DF+KF+ GN
Sbjct: 121 FKLCKIEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNT 180
Query: 614 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 793
M+ GG +GRVG IV RE HPGSF+IVHIKD+ G+TF TRLNNVF+IGKGT+ ++LP
Sbjct: 181 AMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPL 240
Query: 794 GKGIRLTIAEERDKRI 841
KGI+ + ++ ++ I
Sbjct: 241 DKGIKKPLLQQVNETI 256
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 239 bits (585), Expect(2) = 4e-93
Identities = 102/151 (67%), Positives = 128/151 (84%)
Frame = +2
Query: 383 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLD 562
D KGRF +HRITPEEAKYKL KV+++ G K +P+LVTHD RTIRYPDPLIK+ND+IQ+D
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQID 135
Query: 563 IATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLN 742
+ T KI DF KF++GNLCM+TGG NLGR+G I +RE HPGSFD+VH+KD+ G++FATRL+
Sbjct: 136 LETGKITDFFKFDTGNLCMVTGGTNLGRIGVITNRENHPGSFDVVHVKDANGNSFATRLS 195
Query: 743 NVFIIGKGTKAYISLPRGKGIRLTIAEERDK 835
N+F+IGKG +ISLP GKGIR TIAEE+ +
Sbjct: 196 NIFVIGKGNIPWISLPHGKGIRFTIAEEKKR 226
Score = 126 bits (303), Expect(2) = 4e-93
Identities = 57/75 (76%), Positives = 63/75 (84%)
Frame = +2
Query: 74 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 253
MA P+KHLK + APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MAHSPRKHLKHVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 254 VLKIVKQRLIKVDGK 298
V KI Q IK+DGK
Sbjct: 61 VKKIRMQHFIKMDGK 75
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 301 bits (739), Expect = 1e-80
Identities = 140/254 (55%), Positives = 189/254 (74%), Gaps = 1/254 (0%)
Frame = +2
Query: 74 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 253
M+RG KKH KRLNAPK W+L+KLGG++APR S+GPHK + +PLVI +RN+LKY+ E
Sbjct: 1 MSRGIKKHYKRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRE 60
Query: 254 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 433
L I+K+ I VDGKVR D +PAG MDV+SI+ T E +R++YD G F +HRIT +E+
Sbjct: 61 SLNILKKNEIYVDGKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESM 120
Query: 434 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 613
+KLCKV RV+ G K +PY+VTHDGRTIR+P+ LIK NDSI LD+ K++DFIKF G+L
Sbjct: 121 FKLCKVIRVSIGSKGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSL 180
Query: 614 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 793
C++ G N+GR+G ++ GS IV +KD G +F+T+ N+F+IGKGTK++ISLPR
Sbjct: 181 CVVIKGSNIGRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPR 240
Query: 794 GKGIR-LTIAEERD 832
+G+R LT + E D
Sbjct: 241 FRGLRTLTKSLEHD 254
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 299 bits (734), Expect = 6e-80
Identities = 143/242 (59%), Positives = 182/242 (75%)
Frame = +2
Query: 65 LSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALT 244
++ +A GPK+HLKR+ A + WMLDKL GV+A RPSTGPHKLRECLP IFLRNRLKYALT
Sbjct: 9 ITAVAFGPKQHLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPH-IFLRNRLKYALT 67
Query: 245 GNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPE 424
G+EV KI Q IKVDGK+RTD P MDV+SI+K E F LIY + RF +HRITPE
Sbjct: 68 GDEVKKICMQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPE 127
Query: 425 EAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFES 604
E KYKLCK++++ K +P+LV HD T+R+PD LIKVND+IQ+D+ T KI +KF++
Sbjct: 128 EVKYKLCKMRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKI-TALKFDT 186
Query: 605 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 784
GNLC++TGG N GR+G I +RERHP SFD H+KD+ ++F+ +F+I KG K +IS
Sbjct: 187 GNLCLVTGGGNWGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWIS 242
Query: 785 LP 790
LP
Sbjct: 243 LP 244
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 299 bits (734), Expect = 6e-80
Identities = 140/260 (53%), Positives = 189/260 (72%)
Frame = +2
Query: 44 FAFSI*YLSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRN 223
F++S+ +L M R + HLKRL AP W+L K G +A PSTGPHKLRECLP+ IFLR+
Sbjct: 7 FSWSVLFL--MPRCQRFHLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRD 64
Query: 224 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFT 403
RLKYALT E + IVK+RL+KVDGKVRT+ YP G MDV+ + K+NELFR+IYD KGRF
Sbjct: 65 RLKYALTAKEAVAIVKRRLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFC 124
Query: 404 IHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIM 583
+H I +EA +KL +V + G K +P++VTHDGRTI Y DP ++V+D+++ +I T ++
Sbjct: 125 VHHIEAKEASFKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVE 184
Query: 584 DFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 763
IKF+ G++ M+T G N+GRVGTI E+ SFDIVH+KD++G FATR+ NVF+IG+
Sbjct: 185 SVIKFKVGDVAMVTAGGNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGE 244
Query: 764 GTKAYISLPRGKGIRLTIAE 823
ISLP +G+R +I E
Sbjct: 245 NEHPLISLPAREGVRPSILE 264
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 291 bits (715), Expect = 1e-77
Identities = 150/302 (49%), Positives = 196/302 (64%), Gaps = 31/302 (10%)
Frame = +2
Query: 32 IP*DFAFSI*YLSNMARGPKKHLKRLNAPKAWMLD------------------------- 136
+P F+F I ARGPKKHLKR+NAPK+WML+
Sbjct: 71 VPHFFSFEI---YKKARGPKKHLKRINAPKSWMLNKLGGIWVITFFAFRLRKNDFITTIP 127
Query: 137 KLGGVY----APRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV--KQRLIKVDGK 298
KL +Y A RPS GPHKLRE LPL + L+ RL YAL G +V I+ K++ + VDGK
Sbjct: 128 KLKFIYFKKQATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGK 187
Query: 299 VRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKN 478
VR D YP G MDVV IEKT++ FR++YD KGRF + ++ EEAKYKL KV A GP
Sbjct: 188 VRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQ 247
Query: 479 VPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTI 658
+PY+VTHD RTIR+P+P IK+ D+++ D+ KI +F ESGN+C I G N+GRVG I
Sbjct: 248 IPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGII 307
Query: 659 VSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKR 838
E+H GSFDI H+KD+ G+ FATRL N+F++G+G K++I LP G G+R TI EER ++
Sbjct: 308 QHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETILEERKRK 367
Query: 839 IA 844
+
Sbjct: 368 FS 369
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 281 bits (688), Expect = 2e-74
Identities = 131/252 (51%), Positives = 172/252 (68%), Gaps = 1/252 (0%)
Frame = +2
Query: 89 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 268
KKHLKRL APK WML KL GV+APRP GPHKLRECLPL++ +RNRLKYAL E I+
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62
Query: 269 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 448
+Q L+ VD R D YPAGFMDVV I KT + FRL+YDVKGRF + ++ EA+ KL K
Sbjct: 63 RQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMK 122
Query: 449 VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 628
V + T VP VTHDG IRYPDP + D+I ++ K +D IK G ++TG
Sbjct: 123 VVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTG 182
Query: 629 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG-TKAYISLPRGKGI 805
G N GR+G IV E HPG+F+I H+KD++G FATR N+F+IGK +++P+ +G+
Sbjct: 183 GANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGL 242
Query: 806 RLTIAEERDKRI 841
R+ + +ER++R+
Sbjct: 243 RMNVIQEREERL 254
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 188 bits (459), Expect = 1e-46
Identities = 96/261 (36%), Positives = 161/261 (61%), Gaps = 1/261 (0%)
Frame = +2
Query: 74 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 253
M G + HLKR APK+WMLDK GG +A P++GPHK EC+PL + L+YA E
Sbjct: 1 MPTGHRDHLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKE 60
Query: 254 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 433
+ I+ ++ IKV+G+VRT+ +P G DVVSIEKT E FR++Y+V +F +HRI+ EEA
Sbjct: 61 LSIILAEKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEAS 120
Query: 434 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 613
Y+L KV + + +PY+V+ G +IR+ DP I + +I++ T+K++++I +
Sbjct: 121 YRLTKVTKKYEN-QGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKV 179
Query: 614 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK-AYISLP 790
++ G+ GRVG +++ G + + D G+TF+ + +IG+ ++ +I+LP
Sbjct: 180 IFVSRGKARGRVG-VINTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLP 238
Query: 791 RGKGIRLTIAEERDKRIAXKV 853
+ +GIR + E+ + ++ +
Sbjct: 239 KERGIRQSELEKINAQLGEMI 259
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 149 bits (361), Expect = 9e-35
Identities = 93/252 (36%), Positives = 139/252 (55%), Gaps = 11/252 (4%)
Frame = +2
Query: 74 MAR-GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGN 250
MAR G ++ LK L AP+ W + + +A +P GPH + LPL++ +RN L YA T
Sbjct: 1 MARMGGQRRLKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAR 60
Query: 251 EVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVKGRFTIHRITPEE 427
E K++ + +VDG VR D +P GFMDV+ + T E FR++ Y VK F +H I EE
Sbjct: 61 EARKLISEGHFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVK-FFKLHPIPEEE 119
Query: 428 AKYKLCKVKRVATGPKNVPYLVTHDGRTI--RYPDP------LIKVNDSIQLDIATTKIM 583
K +++ T L HDGR I R DP + + D++ + + +I
Sbjct: 120 GDLKPVRIENKTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIK 179
Query: 584 DFIKFESGNLCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIG 760
IKF G + +I GGRN+GRVG + S ++ G +V ++D++G+ F T L+ VF+IG
Sbjct: 180 GHIKFGEGAIAIIVGGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIG 239
Query: 761 KGTKAYISLPRG 796
+ ISLP G
Sbjct: 240 L-DRPVISLPEG 250
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 141 bits (342), Expect = 2e-32
Identities = 84/238 (35%), Positives = 127/238 (53%), Gaps = 10/238 (4%)
Frame = +2
Query: 80 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 259
+GP+KHLKRL AP W L + + RPS GPH + + LPL++ +R+ LKYA E
Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAK 63
Query: 260 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 439
KI++ I +DG R + +PAG MDV+SI + +E + +++D GR ++ + ++ K
Sbjct: 64 KIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLKK--TDKTDVK 121
Query: 440 LCKV--KRVATGPKNVPYLVTHDGR--------TIRYPDPLIKVNDSIQLDIATTKIMDF 589
LCK+ K V G N+ L HDGR + + + K DS+ + I I
Sbjct: 122 LCKIVNKTVVKG-GNI-QLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGH 179
Query: 590 IKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 763
+ F G L ITGG+++G IV E DIV +++ G F T VFI+G+
Sbjct: 180 VAFGEGKLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ 237
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 141 bits (341), Expect = 2e-32
Identities = 84/243 (34%), Positives = 128/243 (52%), Gaps = 16/243 (6%)
Frame = +2
Query: 83 GPKKHLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 259
GPK+H+KRL AP AW + K GG +APRP GPH + +PL+I +R+ L YA E
Sbjct: 7 GPKRHVKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREAR 66
Query: 260 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 439
KI+ + I VDG VR +P +P G MDVV I +T + +R++ + R + I+ EEA+ K
Sbjct: 67 KIITRGEIYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVK 126
Query: 440 LCKVKRVATGPKNVPYLVTHDGRT--IRYPDP------LIKVNDSIQLDI------ATTK 577
+C++K + HDG+ + DP + V DS+ L++ + K
Sbjct: 127 VCRIKNKTYVRGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEPDSGESWK 186
Query: 578 IMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFI 754
++D I FE G GR+ G VG +V + G D++ +++ G F T +
Sbjct: 187 VVDHIPFEEGVWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVENPEGDQFQTTKGRLIA 246
Query: 755 IGK 763
IGK
Sbjct: 247 IGK 249
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 133 bits (321), Expect = 6e-30
Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 4/239 (1%)
Frame = +2
Query: 83 GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLK 262
G +KHLK APK W + + +PS G H + L L + +R+ LK A E +
Sbjct: 5 GSRKHLKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKR 64
Query: 263 IVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKL 442
I+ + VDG+V D +P GFMD++ I KT E++R++ D KGR +++I EE KL
Sbjct: 65 IINSGNVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKL 122
Query: 443 CKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 622
CK+ +T + HDG+ + + V D I L + +I + + + G +I
Sbjct: 123 CKIVNKSTIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELKEGACVLI 182
Query: 623 TGGRNLGRVGT----IVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISL 787
TGG++ G +GT IV+ +P + + I++S F T + F++G+ A ISL
Sbjct: 183 TGGKHTGELGTVSEIIVNESSNPNT---IIIENSAKDEFLTLKDYAFVVGEDAPA-ISL 237
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 128 bits (310), Expect = 1e-28
Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 9/242 (3%)
Frame = +2
Query: 65 LSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALT 244
+ +G +HL+R AP W + + V+ +PS GPH L +P+ I LR+ YA T
Sbjct: 1 MGRKVKGSLRHLRRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKT 60
Query: 245 GNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPE 424
E +I+ R+I+VDG+V TD +P G MDV+ I + +R++ D + I PE
Sbjct: 61 MKEARRILASRVIEVDGRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPE 120
Query: 425 EAKYKLCKVKRVATGPKNVPYLVTHDGRTI-------RYPDPL-IKVNDSIQLDIATTKI 580
EA YKL +++R T HDGR + Y + K D++ + I I
Sbjct: 121 EAGYKLAQIRRKMTVKNGDLQFTLHDGRNVLIRKGSEAYSTAISYKTYDALLITIPRQSI 180
Query: 581 MDFIKFESGNLCMITGGRNLGRVGTI-VSRERHPGSFDIVHIKDSTGHTFATRLNNVFII 757
+ + FE G L ++ GRN+G +G I ++ S +V ++D++G T L V +
Sbjct: 181 VSHVPFEVGTLAIVVDGRNVGFMGRINAIQQVFKRSRALVELEDASGAKSRTILQYVLPV 240
Query: 758 GK 763
GK
Sbjct: 241 GK 242
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 122 bits (295), Expect = 9e-27
Identities = 64/238 (26%), Positives = 119/238 (50%)
Frame = +2
Query: 74 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 253
MA+G KKH KR+++ K G++ + S+GPH + + L+ ++ A E
Sbjct: 1 MAKGIKKHQKRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQE 60
Query: 254 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 433
K+VK + V+GK +P MD +S N+ +R++ G+ T++ I E
Sbjct: 61 AQKVVKTGFLYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKD 120
Query: 434 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 613
K+CKV ++ ++T D R ++ IKV DS+ + +I+ +KFE G+L
Sbjct: 121 LKICKVIKIINASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSL 180
Query: 614 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISL 787
C+IT G++LG + I + ++H++ G + +++ +IG+ + +SL
Sbjct: 181 CLITRGKHLGTIAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 122 bits (293), Expect = 2e-26
Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 3/226 (1%)
Frame = +2
Query: 95 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 274
HL+R +P+ W +++ G ++ +PS GPH +PL + LR+ YA T E I+ +
Sbjct: 3 HLRRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGK 62
Query: 275 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 454
+KVDGKVR D YP G MDV+ + NE +R+I D RI EA K+C+++
Sbjct: 63 GYVKVDGKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIE 122
Query: 455 RVATGPKNVPYLVTHDGRTI---RYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMIT 625
L HDGR I + + S+ +++ K+MD+ + +
Sbjct: 123 DKTMVKAGKIQLNLHDGRNIIVDQDEGRKYETLGSVVVNLEDGKLMDYYPMQPNQYVIAF 182
Query: 626 GGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 763
G N+GR GT+++ R D + + F T LN + +IGK
Sbjct: 183 NGVNVGRHGTLINWVRSFRKRDAIATVKAKDSEFRTVLNYLLVIGK 228
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 118 bits (285), Expect = 1e-25
Identities = 73/231 (31%), Positives = 116/231 (50%), Gaps = 1/231 (0%)
Frame = +2
Query: 101 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 280
KRL + + + + P P+ G H + + L+ +R+ LK + E +I+ L
Sbjct: 6 KRLMVSRQVKIPRKTYFWGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGL 65
Query: 281 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 460
+KVDGK + + GFMDV+ I E +R++Y+ +G + + T E A KL KV+
Sbjct: 66 VKVDGKTVREKKFAVGFMDVIEIN--GESYRVVYNDQGALVLMKETKERASMKLLKVRSK 123
Query: 461 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 640
P N L THDGRT D KV D + + KI + IK + GN IT G ++
Sbjct: 124 VIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHV 183
Query: 641 GRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 790
+ GTI E G S ++VH ++ F+T ++VF+IG +++ P
Sbjct: 184 NQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSP 230
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 116 bits (280), Expect = 6e-25
Identities = 71/192 (36%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Frame = +2
Query: 95 HLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 271
HL+R AP W + K GGV+ RPS GPH L LPL + +R+ LKYA T +E I+
Sbjct: 3 HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIIS 62
Query: 272 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 451
+ +KVDG VR D +P G MDV+ I T E++R++ D + + I+ EEA KL +V
Sbjct: 63 RGYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRV 122
Query: 452 KRVATGPKNVPYLVTHDGR---TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 622
+ L HDGR T IK DS+ D+ I I + G ++
Sbjct: 123 EGKTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVV 182
Query: 623 TGGRNLGRVGTI 658
G N+G GT+
Sbjct: 183 IHGSNVGFSGTL 194
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 115 bits (277), Expect = 1e-24
Identities = 76/235 (32%), Positives = 114/235 (48%), Gaps = 7/235 (2%)
Frame = +2
Query: 92 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 271
K+LKRL AP +W + K + + + GPH LP+ ++LR + A +EV KI+
Sbjct: 3 KYLKRLVAPGSWHIPKKVQKFVMKTAPGPHNAG-ALPVGVWLREHIGLAQNASEVKKILH 61
Query: 272 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 451
QR + V+G+ D G D+VSI K + +R+ DVKG I E AK +LCK+
Sbjct: 62 QRDVLVNGRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKI 121
Query: 452 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATT-----KIMDFIKFESGNLC 616
+ T L G + D K DS+ + + T +I+D + GN+
Sbjct: 122 RNKTTVKGGKVQLNFAFGANV-LADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVA 180
Query: 617 MITGGRNLGRVGTIVSRERHPGSF--DIVHIKDSTGHTFATRLNNVFIIGKGTKA 775
MI GG++ G+VG IV R S ++ DS G F T VF++G+ A
Sbjct: 181 MIVGGKHSGKVGRIVEIIRTASSVPNHVILTDDSAGERFETIEEYVFMVGRSAIA 235
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 113 bits (273), Expect = 4e-24
Identities = 70/224 (31%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Frame = +2
Query: 95 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 274
H KRL+ PK+W + + G + GPH LPL + +R+ LK E +I+ +
Sbjct: 3 HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSE 62
Query: 275 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 454
+ VDG R D +P G DV+++ NE +R++ D KGR ++++ E KLC++
Sbjct: 63 GKVLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLN-ETNVNKLCRIN 121
Query: 455 RVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGR 634
T L +DG I + DS+ L I ++ +KFE GNL M+ GG+
Sbjct: 122 NKTTVKGGKIQLNLNDGTNILGSND-YGTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQ 180
Query: 635 NLGRVGTIVS-RERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 763
+ G G I+ RE + V I T F T + V +IG+
Sbjct: 181 HSGETGKIMEIREVKSSRHNTVMISGET--DFETIEDYVIVIGE 222
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 112 bits (270), Expect = 1e-23
Identities = 69/227 (30%), Positives = 109/227 (48%)
Frame = +2
Query: 95 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 274
HLKR+ AP+ W + + + +P G H +PLV+ LR+ LK A +E+ KI+ +
Sbjct: 5 HLKRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHE 64
Query: 275 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 454
+ VDGKVR D Y G D +SI N +R++ + G+F H + +A K+CK+
Sbjct: 65 GKVLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKF--HLVPVTDASAKICKIV 122
Query: 455 RVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGR 634
L HDG T+ + K DS+ L + KI + G+L M+T G+
Sbjct: 123 NKTALRGGKIQLNLHDGTTMIASND-YKTKDSVILKMPERKIDQHFTYAVGSLVMVTEGK 181
Query: 635 NLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKA 775
+ G +G + + S + + F T VF+IGK + A
Sbjct: 182 HSGEIGKVKEIKVVRSSAPNTVVITTPEGDFETIEQYVFVIGKDSPA 228
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 108 bits (259), Expect = 2e-22
Identities = 76/231 (32%), Positives = 109/231 (47%), Gaps = 8/231 (3%)
Frame = +2
Query: 95 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 274
H+ R AP + K + R GPHK++E +PL I L+ LK T E +I+
Sbjct: 3 HITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFD 62
Query: 275 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 454
+ VDGKVR D YP G MDVV I + R+I D T I+ E+AKYK ++
Sbjct: 63 GKVLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIM 122
Query: 455 RVATGPKNVPYLVTHDGRTIRYP-DPLIKVN----DSIQLDIATTKIMDFIKFESGNLCM 619
T V L DGR I + L + N ++++++ KI + G M
Sbjct: 123 NKTTLKSGVLQLNLEDGRNILLKGEELSQYNLPTLTTLKIELPEQKITTAYTIKEGVYAM 182
Query: 620 ITGGRNLGRVGTI--VSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGK 763
I GGRN G G I + ++ + +V ++ G TF T L NV IG+
Sbjct: 183 IIGGRNAGLHGKISKIQLAKYKRIKYSLVTLEGKDGSTFQTNLINVMAIGE 233
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 106 bits (255), Expect = 6e-22
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Frame = +2
Query: 95 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 274
H+KRL P++W L + ++ +P+ G H C+PL + LR+ L A E +++
Sbjct: 5 HMKRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRMLAT 64
Query: 275 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 454
R + VDG++ TD G MDV+++ + + FR I DV G+ I+ + A KLC+V
Sbjct: 65 RQVLVDGRIETDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAAASKLCRVM 122
Query: 455 RVATGPKNVPYLVTHDGRTIRYPD-PLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 631
+T + HDGR I D L D++ + + + F G +TGG
Sbjct: 123 GKSTITDGKTQIHLHDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKGATAYLTGG 182
Query: 632 RNLGRVGTIVSRE-RHPGSFDIVHIKDSTGHTFATRLNNVFIIG 760
++G +VSR+ + + V D F T + VFIIG
Sbjct: 183 SHIGITAKVVSRDIKRSSKPNEVQFPD-----FGTVADYVFIIG 221
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 105 bits (253), Expect = 1e-21
Identities = 57/188 (30%), Positives = 95/188 (50%)
Frame = +2
Query: 95 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 274
H KR++ PK+W + K + GPH + +PL + LR+ L E +++ +
Sbjct: 4 HQKRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSE 63
Query: 275 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 454
+ VDG R D +P G MD+++I N +R++ D K R ++++ A KLC+++
Sbjct: 64 GNVLVDGVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGAD-KLCRIE 122
Query: 455 RVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGR 634
+ + + +DG I DSI L + K++ IK+E GNL MI GG
Sbjct: 123 GKTSIKEGKIQMRLNDGVNI-IGSNNYNTKDSIILSVPDKKVVKHIKYEVGNLAMIVGGS 181
Query: 635 NLGRVGTI 658
+ G VG+I
Sbjct: 182 HAGEVGSI 189
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 104 bits (249), Expect = 3e-21
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 2/192 (1%)
Frame = +2
Query: 89 KKHLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 265
K+HL+ L P+ W + K G + +PS GPH +P+ ++LR+ L A EV +
Sbjct: 6 KRHLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYL 65
Query: 266 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 445
+ + VDG+ D +P G DV++I + NE +R++ D +G+ + +I EEA K
Sbjct: 66 LNNGKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYG 125
Query: 446 K-VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 622
K +++V+ + Y +T DGRT D K + + +I KI + I E I
Sbjct: 126 KIIRKVSVRGGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLEKDRKAYI 183
Query: 623 TGGRNLGRVGTI 658
G++ GR+G I
Sbjct: 184 IRGKHTGRIGVI 195
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 103 bits (248), Expect = 5e-21
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 2/222 (0%)
Frame = +2
Query: 101 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 280
K + A + + + ++ P+ H + +P++I LR+ LK E+ +I+ +
Sbjct: 7 KIMMASRKLKIPRKTNFWSVTPTPATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNM 66
Query: 281 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKR 457
+KVDG++ D +P GFMDV+SI+ + ++YD KG+ I + P KL K VK+
Sbjct: 67 VKVDGRIVKDRRFPVGFMDVLSIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKK 126
Query: 458 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 637
G + L HDG+TI I +D + + I +I + +K G+ ITGG +
Sbjct: 127 TIIGTGKI-QLGFHDGKTIVTDRKDINTSDVLLMKIPDLEIENVLKIAEGDKVFITGGSH 185
Query: 638 LGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRLNNVFIIG 760
+G + TI S E S ++V++ + F+T + +F++G
Sbjct: 186 VGELATIKSIEVKKSSVKNMVYLNEG----FSTIKDYMFVVG 223
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 95.5 bits (227), Expect = 2e-18
Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Frame = +2
Query: 101 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 280
K + AP+ + + +A G HK +PL+I LR+ LK E+ +I+ L
Sbjct: 6 KIMMAPRKLKIARKSRFWAVNSLPGSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSL 65
Query: 281 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 460
+ VDGKV + GFMD +++ + L + YD KG+ I E KL +VK
Sbjct: 66 VMVDGKVVKERRRGIGFMDTLTVSGNDYL--VSYDRKGKLVILPKPGETKGLKLLRVKGK 123
Query: 461 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 640
+ HDG T+ IK DS+ + I +I+D +KF GN ITGG ++
Sbjct: 124 TYVKGGRIQISFHDGSTMVTDRKDIKNGDSVLVKIPKKEIVDVLKFAPGNRVFITGGSHV 183
Query: 641 GRVGTIVSRE-RHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 790
G + TI S E + ++VH+ + F+T + VF++G K S+P
Sbjct: 184 GEIATIKSIEIKSSSGENMVHMNEG----FSTVSSYVFVMG-SPKYTFSMP 229
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 92.7 bits (220), Expect = 1e-17
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Frame = +2
Query: 101 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 280
KR+ AP AW + + Y S+GPH LP+ I+LR+ +++AL EV KI+ R
Sbjct: 5 KRMTAPDAWQIARKESKYVVSTSSGPHD-GSALPIGIWLRDHMQFALNTKEVRKILHDRQ 63
Query: 281 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 460
+ ++G + TD D++S K ++ + ++ D KGR + I+ + AK +L KV
Sbjct: 64 VLLNGHIVTDEHIGIDVFDIISFPKIDKHYMILVDEKGRHNEYEISADAAKLQLVKVANK 123
Query: 461 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIA---TTKIMDFIKFESGNLCMITGG 631
T + G + K DS+ + IA + + GN+ +I GG
Sbjct: 124 TTIKGGKTQINLTSGANF-IGEENCKGKDSLVIGIAGDDRFAVQQHFPYAVGNMAIIIGG 182
Query: 632 RNLGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRLNNVFIIG 760
++ + G +V S + V I+D+ G+ F T + V++IG
Sbjct: 183 QHTMKTGKLVEILVQESSLPNRVIIEDADGNKFETIEDYVYMIG 226
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 87.8 bits (208), Expect = 3e-16
Identities = 56/167 (33%), Positives = 87/167 (52%)
Frame = -1
Query: 835 LVPLLGDGEADALXARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHD 656
L+ + DGE D L +RD RL A D EHV + R + ++ GVL VHN EG + LA D
Sbjct: 27 LLLFVDDGELDTLALGKRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEGTDVLLAALD 86
Query: 655 GAHTPQVTASRDHTQVPGLKLDEVHNLRSCNV*LDGIVDFDKWVWIADGAAIMRYQVRNI 476
V + DH Q ++LD + +L +V +G+ D + + +GAA+++ R+
Sbjct: 87 HPDATGVVTTGDHAQSADVELDRIGDLVRRDVDHNGVTLLDHGIRVTNGAAVVQTDARHA 146
Query: 475 LRSGRHTLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLLN*DNI 335
L QLVL D V ES+L ++D + FI+L + D++
Sbjct: 147 LVPELLAPHLAQLVLRFDSLDAVHNESSLGVVDEPEVFIALFDGDDV 193
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 87.4 bits (207), Expect = 4e-16
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 2/223 (0%)
Frame = +2
Query: 95 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 274
H KRL+ P +W +++ + + GPH +PL+I LR+ L YA E + +
Sbjct: 4 HQKRLSVPNSWPVERKTATFTVKAGAGPHG-ESGVPLLIVLRDVLGYADNRKEARYALNE 62
Query: 275 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 454
+ ++GK +D P G D+++ + E +R+ GR + I P+ A+ KL K+
Sbjct: 63 DNVLINGKAISDEERPVGMFDILAFTEREEYYRVFPGEGGRLALTAIDPDAAQSKLGKIV 122
Query: 455 RVATGPKNVPYLVTHDGRT-IRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 631
L HDG T I D DSI + +++ ++E G L G
Sbjct: 123 TKTHVSGGDVQLGLHDGETLIVEDDQTYDAGDSIVVGNEDGEVVAHFEYEEGALVTAVDG 182
Query: 632 RNLGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRLNNVFII 757
+ G VG + + PGS + V + G F T V +I
Sbjct: 183 AHAGEVGEVEEIQVTPGSAQNNVIVSQDEGEGFETVEEYVVVI 225
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 84.2 bits (199), Expect = 4e-15
Identities = 53/189 (28%), Positives = 83/189 (43%)
Frame = +2
Query: 92 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 271
K LKR AP W + + G + G H +P + LR+ L T E K +
Sbjct: 8 KKLKRQMAPSFWGITRKGKRFVVTVHPGAHSKHRSIPSAVLLRDTLGAVSTLREAKKSIY 67
Query: 272 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 451
++VDG RT + G MDVV + T +++R++ +I E K+C+V
Sbjct: 68 SGNVEVDGVKRTSLHHGIGLMDVVELGGTGDIYRMVPSGGAILKPVKIEAAEKDRKICRV 127
Query: 452 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 631
+ + HDGR++ D + V DS + + KI+ + E G ++T G
Sbjct: 128 TSKTSISGGRTQIGFHDGRSL-ISDEKVSVGDSCLVQVPGQKILKVARMEKGAHAVVTRG 186
Query: 632 RNLGRVGTI 658
N G GTI
Sbjct: 187 TNAGSTGTI 195
>UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 186
Score = 57.6 bits (133), Expect = 4e-07
Identities = 31/89 (34%), Positives = 49/89 (55%)
Frame = -1
Query: 850 LGCDALVPLLGDGEADALXARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMS 671
LGC L+ L D + D L R+R RL LA+ EH+ Q + + G+L+V ++G +
Sbjct: 88 LGCKPLLGLFDDRQLDXLTLRKRYPRLCPLANDEHIAQTSCKFMPSGILNVDGLKGPLVL 147
Query: 670 LAGHDGAHTPQVTASRDHTQVPGLKLDEV 584
L D ++T V ++ H +P +K DEV
Sbjct: 148 LPVLDDSNTAPVPSTSHHDNIPNIKFDEV 176
>UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransferase;
n=4; Rhodospirillaceae|Rep: Predicted SAM-dependent
methyltransferase - Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264)
Length = 820
Score = 41.9 bits (94), Expect = 0.021
Identities = 24/55 (43%), Positives = 28/55 (50%)
Frame = +1
Query: 700 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARXGHPPHHRRGAGQAHRXQGRRAV 864
H+G TH R + RQGH+ V AA R GHP HHR G Q R G+ V
Sbjct: 24 HRGDQETHDRIGPQLVPGTRQGHQAVDHAAPR-GHPQHHREGHAQGLRPIGQSGV 77
>UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 40.3 bits (90), Expect = 0.063
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +2
Query: 167 STGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 346
+T P +L + + L + ++ K L E L I KQ+ +KV+ K + DPT+P D S
Sbjct: 100 NTQPRELLKVVNLDPKIMDKEKKKL--EEELDINKQQKVKVEHKKQLDPTFPRNDFDKFS 157
Query: 347 IEKTNELFRLIYDVKG 394
IE +++ L+ + KG
Sbjct: 158 IEDMDQVLNLLSNYKG 173
>UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 546
Score = 39.1 bits (87), Expect = 0.15
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 733 EVEQRVHNRQ---GHEGVHLAAARXGHPPHHRRGA 828
E Q+VH R+ G E +HL + HPPHHR+GA
Sbjct: 441 EYVQKVHEREMKSGEEAIHLPNSGTHHPPHHRKGA 475
>UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 189
Score = 38.3 bits (85), Expect = 0.25
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = -3
Query: 842 RCACPAPRRW*GGCPXRAAARCTPSCPCRL*TRCSTSW-RRCVPWSP*CAQCRRSRDVSR 666
RC P R CP R ARC CP R RC RC P RR R +
Sbjct: 10 RCPARCPARCPARCPARCPARCPARCPARCPARCPARCPARCPAHCPNNGAARRWRPAAA 69
Query: 665 GTRWCP 648
R P
Sbjct: 70 ARRARP 75
Score = 33.9 bits (74), Expect = 5.5
Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = -3
Query: 839 CACPAPRRW*GGCPXRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQC-RRSRDVSRG 663
C P R CP R ARC CP R RC RC P A+C +
Sbjct: 7 CFARCPARCPARCPARCPARCPARCPARCPARCPA---RCPARCP--ARCPAHCPNNGAA 61
Query: 662 TRWCPHA 642
RW P A
Sbjct: 62 RRWRPAA 68
>UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_03000514;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03000514 - Ferroplasma acidarmanus fer1
Length = 317
Score = 37.5 bits (83), Expect = 0.44
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -1
Query: 367 QFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQDFVSGQSILQTIPQENHQGQALA 188
Q I+ N +NI + I + N P E LFH F DFVSG ++ I + + + +A
Sbjct: 50 QVINTYNDENILEIINIPDIKYNIPDAEKEILFHKFIDFVSGNKLISGIMKIMYLDRKIA 109
Query: 187 QLV 179
Q +
Sbjct: 110 QFI 112
>UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A630024D08
product:hypothetical Histidine-rich region containing
protein, full insert sequence; n=1; Mus musculus|Rep: 3
days neonate thymus cDNA, RIKEN full-length enriched
library, clone:A630024D08 product:hypothetical
Histidine-rich region containing protein, full insert
sequence - Mus musculus (Mouse)
Length = 139
Score = 37.1 bits (82), Expect = 0.59
Identities = 27/70 (38%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 646 CGHHRVPRETSR-LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARXGHPPHHRR 822
C HH R LLR + G H RH +R H RQ EGV R GHP HH
Sbjct: 55 CAHHLSADPAERVLLRGVSPPGEALGHQRHY--ERQHVRQHVEGVGQHGERRGHPAHHHL 112
Query: 823 GAGQAHRXQG 852
Q H +G
Sbjct: 113 ---QHHEHEG 119
>UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 762
Score = 37.1 bits (82), Expect = 0.59
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 652 HHRVP-RETSRLLRHCAHQGL-HGTHLRHEVEQRVHNRQGHEGVHLAAARXGHPPHHRRG 825
H VP R + RH A Q H H R EQR R+G L GHP H +
Sbjct: 112 HDPVPQRRLAGRRRHRAQQPRRHHRHQRDRGEQRAAQRKGDHRRKLLEHHAGHPLHEEQ- 170
Query: 826 AGQAHRXQGRRA 861
Q HR +G+RA
Sbjct: 171 -RQEHRQRGQRA 181
>UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: LigA
- Mycobacterium sp. (strain MCS)
Length = 634
Score = 36.3 bits (80), Expect = 1.0
Identities = 30/78 (38%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Frame = +1
Query: 652 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRV----HNRQGHEGVHLAAARXGHPPH-- 813
HHR +R RH H G R E+R+ H R H HL AAR H
Sbjct: 267 HHRPTATPARQHRHRPHVD-SGDRRRPPRERRLVLPRHGRTAHAD-HLPAARFPRQRHDV 324
Query: 814 --HRRGAGQAHRXQGRRA 861
HRR G+AH+ GRRA
Sbjct: 325 QPHRRLPGRAHQQCGRRA 342
Score = 33.5 bits (73), Expect = 7.2
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Frame = +1
Query: 649 GHHRVPRETSR---LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVH-LAAARXG-HPPH 813
G R PR SR R +G G R +R H G G A R G HP
Sbjct: 92 GRGREPRRRSRGGTRRRGRGGRGGRGGTRRRPCRERSHRGAGRRGRRGTARGRHGAHPGR 151
Query: 814 HRRGAGQAHRXQGRRA 861
RR G+AHR RR+
Sbjct: 152 RRRHRGRAHRRHRRRS 167
>UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=6;
Bacteria|Rep: Cobyrinic acid a,c-diamide synthase -
Geobacter bemidjiensis Bem
Length = 311
Score = 36.3 bits (80), Expect = 1.0
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +1
Query: 682 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARXGHPPHHRRGAGQAHRXQGRRA 861
+ H H+ HGT HE E R H+ HE +H GHP H G A + RR
Sbjct: 1 MCEHHNHEHSHGTD--HEHEHRHHDHHHHENLH-----HGHPHHATPQGGDAAPLEARRG 53
Query: 862 VXL 870
+ +
Sbjct: 54 LRI 56
>UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 110
Score = 36.3 bits (80), Expect = 1.0
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 532 YQSQRFHPVRHCNYEDYGLHQV*VRELVY--DHGRP*LGACGHHRVPRETSRLLRHCAHQ 705
+ + + HP+R Y G+ V++LV DH R A HR R RL + H+
Sbjct: 31 FHAFKIHPLRIA-YRT-GIDVTLVQQLVSGEDHQRLFKAALARHRKSRRDQRLHKSLRHK 88
Query: 706 GLHGTHLRHEVEQRVHNRQGHE 771
G+ L+H++EQ +G +
Sbjct: 89 GIAQAELQHKIEQDYQETKGQK 110
>UniRef50_Q4QD98 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 928
Score = 36.3 bits (80), Expect = 1.0
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Frame = +1
Query: 724 LRHEVEQRVHNRQGHEGVH--LAAARXGHPPHHRRGA-------GQAHRXQGRRAVXLRT 876
L H V +H+R G G H + AR PP HR+G G++ R Q RRA+ L T
Sbjct: 412 LLHRVLLELHDRNGSGGAHRQSSPARGETPPRHRQGTDAAVAAPGESERQQSRRAMRLLT 471
>UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 228
Score = 36.3 bits (80), Expect = 1.0
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +1
Query: 541 QRFHPVRHCNYEDYGLHQV*VRELVYDHGRP*LGACGHHRV-PRETSRLLRHCAHQGLHG 717
Q HP+ H ++ H +R+L++ P HH + P + + L H HQ LH
Sbjct: 64 QHHHPI-HQHHHHTHQHPHHIRQLLHHIHLP-----HHHTLQPPQVTVQLHHHIHQHLHH 117
Query: 718 TH-LRHEVEQRVH-NRQGHEGVHLAAARXGHPPHHRR 822
TH L H + Q + Q H +H PHH R
Sbjct: 118 THQLHHHIHQLLQVIVQHHHPIHQHHHHTHQHPHHIR 154
>UniRef50_Q7U147 Cluster: PROBABLE OXIDASE; n=7; Mycobacterium
tuberculosis complex|Rep: PROBABLE OXIDASE -
Mycobacterium bovis
Length = 504
Score = 35.1 bits (77), Expect = 2.4
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -3
Query: 206 PGASTRATCGDRLTVSVHTHRQVCPTSMLWERLSASNAS*GLAPCWTSI 60
PG RAT GD + VSV T+R PTS+ W ++ N G P +I
Sbjct: 93 PGPLIRATVGDEIVVSV-TNRLGDPTSVHWHGIALRNDMDGTEPATANI 140
>UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacillus
anthracis
Length = 265
Score = 34.7 bits (76), Expect = 3.1
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = +1
Query: 691 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARXGHPPHHRRGAGQAHRXQGRRAV 864
H HQG HG H H + GH G H GH HH H ++ V
Sbjct: 116 HHHHQGHHGHHGHHHHQ----GHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQV 169
Score = 33.1 bits (72), Expect = 9.6
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +1
Query: 691 HCAHQGLHGTHLR--HEVEQRVHNRQGHEGVHLAAARXGHPPHHRRGAGQAH 840
H H G HG H H H+ QGH G GH HH Q H
Sbjct: 119 HQGHHGHHGHHHHQGHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQVH 170
>UniRef50_A0TIV4 Cluster: Putative uncharacterized protein; n=2;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 597
Score = 34.7 bits (76), Expect = 3.1
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = +1
Query: 661 VPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARXGHPPHHRRGAGQAH 840
VPR+ SR L A + G + H+V+ R G EG A A G P HR G QA
Sbjct: 527 VPRQASRHLHEAA--AVPGDQVLHQVDAFAE-RHGGEGA--ADADDGRPDQHRMGVRQAE 581
Query: 841 RXQGRRA 861
+ G A
Sbjct: 582 QRLGASA 588
>UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 906
Score = 34.7 bits (76), Expect = 3.1
Identities = 32/103 (31%), Positives = 44/103 (42%)
Frame = -2
Query: 633 RPPVIIHKFPDSNLMKSIIFVVAMSNWMESLTLISGSG*RMVRPSCVTKYGTFLGPVATR 454
RPP H SN + S + A S +S+TLI +R T TF+ VA
Sbjct: 298 RPPRTAHIAQSSNPLLSRLDSTASST-SQSITLIGSDYDAYLRYQAATS--TFVASVAQT 354
Query: 453 LTLHNLYLASSGVIRWIVNLPLTS*IRRNSSLVFSIETTSINP 325
+ + SS + WI++ + I N L SI TTS P
Sbjct: 355 DNVSVCFTQSSSLGPWILDSGASDHISGNKHLFSSITTTSALP 397
>UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1;
Gallus gallus|Rep: PREDICTED: similar to MEGF6 - Gallus
gallus
Length = 1119
Score = 34.3 bits (75), Expect = 4.1
Identities = 23/52 (44%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = -3
Query: 767 CPCRL*TRCSTSWRRCVPWSP*CAQ----CRR-SRDVSRGTRWCPHAPSYGL 627
C CR R RRC PWSP CAQ C + RDV +G C P Y L
Sbjct: 144 CRCRRQYRLREDGRRCAPWSP-CAQRNGGCMQLCRDV-QGAARCECRPGYRL 193
>UniRef50_UPI00005A603F Cluster: PREDICTED: hypothetical protein
XP_549800; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_549800 - Canis familiaris
Length = 253
Score = 34.3 bits (75), Expect = 4.1
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 525 THLSKSTIPSS*TLQLRRLWTS-SSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCT 701
THLS +T + T LR W S ++ +PG SR T G SC R A T CT
Sbjct: 126 THLSITTSIGA-TCALRATWASDTTCTPGATCASRATCTPGA---SCSLRATCASVTTCT 181
Query: 702 SRTPRDTPSP 731
R R T +P
Sbjct: 182 PRVMRATLTP 191
>UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: VrrB
- Bacillus anthracis
Length = 115
Score = 34.3 bits (75), Expect = 4.1
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +1
Query: 691 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARXGHPPHHRRGAGQAH 840
H HQG HG H H H+ QGH G H GH HH Q H
Sbjct: 17 HQGHQGHHG-HQGH------HHHQGHHGHHGHHHHQGHHGHHGHHQQQVH 59
>UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4;
cellular organisms|Rep: Parallel beta-helix repeat
protein - Oceanicola granulosus HTCC2516
Length = 3143
Score = 34.3 bits (75), Expect = 4.1
Identities = 37/125 (29%), Positives = 44/125 (35%), Gaps = 8/125 (6%)
Frame = +1
Query: 508 HHPLSRPTYQSQRFHPVRHCNYEDYGLHQV*VRELVYDHGRP*LGACGH--------HRV 663
H R +++R RH G HQ R+ D GR GH HR
Sbjct: 2934 HRHRHRRVGRARRRAGQRHRRGSRIGRHQRGARD---DDGRDRRRRVGHRDGRRHRGHRR 2990
Query: 664 PRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARXGHPPHHRRGAGQAHR 843
R R LR A G RH +R +R+ H G L A G P RRG
Sbjct: 2991 RRGGDRELRRLARLLAEGRRHRHRA-RRHRDREDHRGAGLGARSGGRPDGARRGRRHPRA 3049
Query: 844 XQGRR 858
RR
Sbjct: 3050 GDERR 3054
>UniRef50_Q0S5H2 Cluster: Undecaprenyl-phosphate galactose
phosphotransferase; n=4; Bacteria|Rep:
Undecaprenyl-phosphate galactose phosphotransferase -
Rhodococcus sp. (strain RHA1)
Length = 488
Score = 34.3 bits (75), Expect = 4.1
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -1
Query: 751 EHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQVPGLKLDEVHNLR 572
E V+ E +RG D + V G+ + GH G H ++T + V G +LD + +L
Sbjct: 164 EGAVRILAESFARGTADGYRV--VGVCIPGHSGEHGDKITVAGRDIPVLGSELDVIDSLG 221
Query: 571 SCN 563
C+
Sbjct: 222 FCH 224
>UniRef50_A7CME0 Cluster: Putative uncharacterized protein
precursor; n=1; Ralstonia pickettii 12D|Rep: Putative
uncharacterized protein precursor - Ralstonia pickettii
12D
Length = 533
Score = 34.3 bits (75), Expect = 4.1
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 625 GRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQ-RVHNRQGHEG 774
G+P + A HRV +E + R H+ + H+ EQ RVH R G EG
Sbjct: 317 GKPAVQALEAHRVDQERADRRRDAPHRNVQRFHVDARAEQERVHQRDGAEG 367
>UniRef50_A5P378 Cluster: Putative uncharacterized protein; n=3;
Proteobacteria|Rep: Putative uncharacterized protein -
Methylobacterium sp. 4-46
Length = 1338
Score = 34.3 bits (75), Expect = 4.1
Identities = 33/88 (37%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = +1
Query: 604 RELVYDHGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQ-GHEGVH 780
R L RP G G R H H+G G+ LR R R G EG
Sbjct: 932 RSLARPRRRP-PGRAGRDGADRRRRAERAHARHRGAGGSRLRRH---RGGGRAVGPEG-- 985
Query: 781 LAAARXGH-PPHHRRGAGQAH-RXQGRR 858
AA R H PP HR GA + H R GRR
Sbjct: 986 -AAIRRAHRPPDHRCGAARRHERPAGRR 1012
>UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 450
Score = 34.3 bits (75), Expect = 4.1
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +1
Query: 700 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARXGHPPHHRRGAGQAHRXQGRRA 861
H G+ H H +Q+ H+ GH H + G PHHR GR++
Sbjct: 287 HPGMEHHHHPHHHQQQHHSSHGHPAQHQGSG--GKQPHHRNNDSFNRNSSGRKS 338
>UniRef50_Q9P557 Cluster: Related to merozoite surface antigen 2;
n=1; Neurospora crassa|Rep: Related to merozoite surface
antigen 2 - Neurospora crassa
Length = 388
Score = 34.3 bits (75), Expect = 4.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 588 SSSLSPGTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPSP 731
S+S + T VT G+ P A P+P+T T+ P DTP P
Sbjct: 276 STSAAAATAAAPTNEVTDGLRKPDASAEQQPSPTTATTTTPPTDTPKP 323
>UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Hydrolase,
alpha/beta fold family protein - Plesiocystis pacifica
SIR-1
Length = 310
Score = 33.9 bits (74), Expect = 5.5
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +2
Query: 125 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVR 304
W +D LGG+ K+R LP+ +F ++ G V +V + ++ G R
Sbjct: 216 WWVDFLGGLIELGDDAKLRKIRADLPIYVFAGDQDPVGAQGKNVRALVDR--LRATGHAR 273
Query: 305 TDPT-YPAGFMDVVSIEKTNELFRLIYDVKG 394
T YP G ++++ + +++ R + D G
Sbjct: 274 VKQTLYPGGRHEMINERERDQVTRELIDWLG 304
>UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular
organisms|Rep: Tryptophan-rich antigen - Plasmodium
vivax
Length = 2662
Score = 33.9 bits (74), Expect = 5.5
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +1
Query: 691 HCAHQGLHGTHLRHEVEQRVHNRQGHE-GVH--LAAARXGHPPH-HRRGA--GQAHR 843
H H G H +H ++ VH Q H+ GVH A + HP H H+RG QAH+
Sbjct: 389 HPKHAHQKGVHPKHAHQKGVHPEQAHQRGVHPEQAHQKGVHPKHAHQRGVHPEQAHQ 445
>UniRef50_Q4S9F1 Cluster: Chromosome undetermined SCAF14697, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF14697, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 2163
Score = 33.5 bits (73), Expect = 7.2
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Frame = +3
Query: 405 STVSPLRRLSTSCVKSSVWRPDLRMFR---TW*RMMAAPSAIQTHLSKSTIPSS*TLQLR 575
S +PL+ L + C+ + + P+ ++R T R + P + T L+K ++ S+
Sbjct: 1067 SMFAPLKTLPSQCL-APIKIPEECVYRPSWTMGRELLNPVPVMTFLNKDSVGSAMDQDYT 1125
Query: 576 RLWTSSSLSP--GTCV*SREAVTWGVWAPSCPARDIPAPSTLCTSRTPRDTPSPRG 737
+ +T + +P + T + +P+ P P P T T RTPR S +G
Sbjct: 1126 QTYTPQTHTPFMSNSAPPSNSGTGILPSPATPRFSAPTPRTPRTPRTPRGPSSVQG 1181
>UniRef50_A6E8K7 Cluster: Putative uncharacterized protein; n=1;
Pedobacter sp. BAL39|Rep: Putative uncharacterized
protein - Pedobacter sp. BAL39
Length = 195
Score = 33.5 bits (73), Expect = 7.2
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -2
Query: 261 FRTSFPVKAYFRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKRFK---CF 91
F F KA FR+ +RK+ G+H+ +D A+T PSL H KR++ F
Sbjct: 11 FLGRFFFKARFRKLIRKL--GRHTEVYLVDIDNTLAHTWPSLQQRHYSAENKRYRSLPIF 68
Query: 90 LGPRAML 70
+G R+ L
Sbjct: 69 IGMRSYL 75
>UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis
thaliana|Rep: At1g67870/T23K23_28 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 279
Score = 33.5 bits (73), Expect = 7.2
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 700 HQGLHGTHLR--HEVEQRVHNRQGHEGVHLAAARXGHPPHHRRGAGQAHR 843
HQG+HG + H ++ + + H+G+H + GH H+ G G H+
Sbjct: 154 HQGMHGMQHQGGHGMQHQGGHGMQHQGMHGMQHQGGHGMEHQGGHGMQHQ 203
>UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p -
Drosophila melanogaster (Fruit fly)
Length = 647
Score = 33.5 bits (73), Expect = 7.2
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 652 HHRVPRETSRLLRHCAH-QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARXGHP--PHHRR 822
HH+ ++ + +H H Q H H +H ++Q+ +Q H GHP PHH
Sbjct: 123 HHQQQQQHQQQQQHQQHLQQHHQAHHQHVLQQQQQQQQQHSQHQHQQQHHGHPLHPHHTH 182
Query: 823 GAGQAHRXQ 849
Q + Q
Sbjct: 183 QQQQQQQQQ 191
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 33.1 bits (72), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 488 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 622
+ DGR ++ D +IKVND ++TT+I+D ++ G +C++
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIV 751
>UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1;
Psychrobacter sp. PRwf-1|Rep: TonB-dependent receptor -
Psychrobacter sp. PRwf-1
Length = 836
Score = 33.1 bits (72), Expect = 9.6
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +1
Query: 655 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARXGHPPHHRRGAGQ 834
HR+ R T L H H H H+ E+ H GHE GH H
Sbjct: 314 HRINRLTCGLDEHEHGAHEHHDHEEHDHEEHEHEEHGHEAHEHGHEEHGHQEHEHEHDEH 373
Query: 835 AH 840
H
Sbjct: 374 EH 375
>UniRef50_Q01J77 Cluster: OSIGBa0152K17.10 protein; n=5; Oryza
sativa|Rep: OSIGBa0152K17.10 protein - Oryza sativa
(Rice)
Length = 444
Score = 33.1 bits (72), Expect = 9.6
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 673 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARXGHPPHHRRGAG 831
TSRL LR H H HG + RH++ +R R H L A G P + AG
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAG 80
>UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 471
Score = 33.1 bits (72), Expect = 9.6
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +1
Query: 691 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARXGH--PPHHRRGAGQAHRXQG 852
HC G HG H R H G G R GH PPHH G++ G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414
>UniRef50_Q4XGP3 Cluster: Pc-fam-3 protein putative; n=1; Plasmodium
chabaudi|Rep: Pc-fam-3 protein putative - Plasmodium
chabaudi
Length = 160
Score = 33.1 bits (72), Expect = 9.6
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +1
Query: 691 HCAHQGLHGTHLRHEVEQRVHNRQGHE--GVHLAAARXGHPPHHRRGAGQAH 840
H H G H HL H + H+ + HE G H H HH G H
Sbjct: 73 HHEHHGHHEHHLHHAHGEHHHHGEHHEHHGHHEHHLHHAHGEHHHHGEHHEH 124
>UniRef50_P83183 Cluster: Cysteine-rich protamine; n=1; Eledone
cirrhosa|Rep: Cysteine-rich protamine - Eledone cirrhosa
(Curled octopus) (Ozaena cirrosa)
Length = 84
Score = 33.1 bits (72), Expect = 9.6
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = -3
Query: 806 GCPXRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQCRRSRDVSRGTRWCP 648
G R RC P C R RC RRC C CRR R R CP
Sbjct: 3 GSKPRCRPRCKPRCRSRSKKRCRRCRRRCSRIVKKC--CRRRSKCCRRRRRCP 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 942,982,990
Number of Sequences: 1657284
Number of extensions: 21724234
Number of successful extensions: 70669
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 65708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70446
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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