BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_M10
(871 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 132 8e-30
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 88 2e-16
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 77 8e-13
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 70 9e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 66 1e-09
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 58 2e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 52 1e-05
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 46 0.001
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.082
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 40 0.11
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.44
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.3
UniRef50_UPI0000E256C9 Cluster: PREDICTED: hypothetical protein;... 35 3.1
UniRef50_A1D352 Cluster: Chromodomain helicase (Chd1), putative;... 34 5.4
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 33 7.1
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_P40345 Cluster: Phospholipid:diacylglycerol acyltransfe... 33 7.1
UniRef50_UPI0000EB1A8A Cluster: Polycystic kidney disease 1-like... 33 9.4
UniRef50_Q754K3 Cluster: AFR069Cp; n=1; Eremothecium gossypii|Re... 33 9.4
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 132 bits (320), Expect = 8e-30
Identities = 57/59 (96%), Positives = 57/59 (96%)
Frame = +1
Query: 631 PWXAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFS 807
P APSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFS
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFS 107
Score = 81.4 bits (192), Expect = 3e-14
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = +3
Query: 489 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 635
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 50
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 88.2 bits (209), Expect = 2e-16
Identities = 45/81 (55%), Positives = 51/81 (62%)
Frame = -2
Query: 840 DDSYRIRRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSE 661
DDSYR RS RAERGVRA+SPAWSERP P+ DT SVSYEKAPRFPKG++ +
Sbjct: 13 DDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGR 72
Query: 660 QESARGSXPGGNAWYLYSPVG 598
A G + SPVG
Sbjct: 73 NRRAHEGAAGEKSPASLSPVG 93
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 648 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 758
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 76.6 bits (180), Expect = 8e-13
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3
Query: 507 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 635
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/41 (82%), Positives = 35/41 (85%)
Frame = +3
Query: 513 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 635
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL 118
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 320 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 418
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 69.7 bits (163), Expect = 9e-11
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -2
Query: 840 DDSYRIRRSGRAERGVRAHSPAWSERPTPN 751
DDSYRIRRSGRAERGVRAHSPAWSERPTPN
Sbjct: 13 DDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 66.1 bits (154), Expect = 1e-09
Identities = 40/60 (66%), Positives = 41/60 (68%)
Frame = -1
Query: 562 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIXLILWITVLPPLSELIPLAAAERP 383
MLVRGAEPMEKR + L V LL CS L LILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -2
Query: 837 DSYRIRRSGRAERGVRAHSPAWSERPTPN*DT 742
+SYRIRRS RAERGV A+SPAWSERPTP+ DT
Sbjct: 14 NSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 296 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 454
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/66 (45%), Positives = 33/66 (50%)
Frame = +1
Query: 610 IKIPGVSPWXAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVC 789
+KI VS P P PPFSL + + GIS RCRSFAPSWAV
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 790 TNPPFS 807
NPPFS
Sbjct: 92 KNPPFS 97
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 46.4 bits (105), Expect = 0.001
Identities = 21/25 (84%), Positives = 22/25 (88%), Gaps = 1/25 (4%)
Frame = +3
Query: 786 VHEPPVQPDRCALSGNYRL-SXPGR 857
+HEPPVQPDRCALSGNYRL S P R
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVR 25
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 222 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 344
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.082
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 366 ERGSGRAPNTQTASPRALADSLMQ 295
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 39.5 bits (88), Expect = 0.11
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +3
Query: 444 RIRXITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTR 623
R I +R + + + P T F S PLT+ITKI Q + +T+ +YK T
Sbjct: 40 RNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTT 99
Query: 624 RFPLXS 641
FPL S
Sbjct: 100 PFPLQS 105
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.5 bits (83), Expect = 0.44
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 107 MIRYIDEFGQTTTRMQ 154
MIRYIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.9 bits (79), Expect = 1.3
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -1
Query: 589 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIXLILWITVLPPL 419
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 418 SELIPL 401
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_UPI0000E256C9 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 211
Score = 34.7 bits (76), Expect = 3.1
Identities = 27/89 (30%), Positives = 38/89 (42%)
Frame = -3
Query: 779 QLGANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGAXQGETPGIFIVLS 600
Q A + + ++P R+ R GG+ GKR+ R R+ + G +
Sbjct: 65 QRAAKEGEKGKLPLGGRRRRSETGRGTAGGREGGKRRERGARSSSRHRPRQIRGRGEAQA 124
Query: 599 GFATSDLSVDFCDARQGGGAYGKTPATRP 513
+ S D DA QGG A GK PA RP
Sbjct: 125 R-PRQEASGD--DATQGGRARGKPPAARP 150
>UniRef50_A1D352 Cluster: Chromodomain helicase (Chd1), putative;
n=10; Pezizomycotina|Rep: Chromodomain helicase (Chd1),
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 1523
Score = 33.9 bits (74), Expect = 5.4
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +3
Query: 441 HRIRXITQERTCEQKASKRPGTVKRPRC--WRFSIGSAPLTSITKIDAQVRGGETRQDYK 614
HR+ + + K +K PG V R + S+ LT+ T + A+ ++++
Sbjct: 1261 HRVEKKNERANADDKTTKTPGAVHLVRRVEYLLSVLRDKLTNGTNVSARRAVENHHRNHR 1320
Query: 615 DTRRFPLXSSLVRSPVPTLPLTGYLSA 695
T R + +S+ SP P++ G+ A
Sbjct: 1321 STARTNVSASVSASPAPSIARKGHREA 1347
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.4
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 256 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 92
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 33.5 bits (73), Expect = 7.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -3
Query: 728 MRKRHASRREKGGQVSGKRQGRNRRAHEGAXQ 633
+R+R A RR GG+ G+R+GRNR+ + Q
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQQRGQ 386
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.5 bits (73), Expect = 7.1
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -1
Query: 562 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIXLILWITVLPPLSELIPLAAA 392
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
>UniRef50_P40345 Cluster: Phospholipid:diacylglycerol
acyltransferase; n=4; Saccharomycetales|Rep:
Phospholipid:diacylglycerol acyltransferase -
Saccharomyces cerevisiae (Baker's yeast)
Length = 661
Score = 33.5 bits (73), Expect = 7.1
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = -3
Query: 725 RKRHASRREKGGQVSGKRQGRNRRAH-EGAXQGETPGIFIVLSGFA-TSDLSVDFCDARQ 552
+K + KGG V KR+ RN H +G GI SG A ++ DF R
Sbjct: 12 QKSDSDENNKGGSVHNKRESRNHIHHQQGLGHKRRRGI----SGSAKRNERGKDFDRKRD 67
Query: 551 GGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYXPDSVDN 435
G G + R + F G+LL SF Y + D+
Sbjct: 68 GNGRKRWRDSRRLIFILGAFLGVLLPFSFGAYHVHNSDS 106
>UniRef50_UPI0000EB1A8A Cluster: Polycystic kidney disease 1-like 1
protein (Polycystin-1L1).; n=1; Canis lupus
familiaris|Rep: Polycystic kidney disease 1-like 1
protein (Polycystin-1L1). - Canis familiaris
Length = 2474
Score = 33.1 bits (72), Expect = 9.4
Identities = 25/59 (42%), Positives = 30/59 (50%)
Frame = +3
Query: 624 RFPLXSSLVRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV*VVRSKLGCVHEPP 800
R PL S VR P+PT L+ L + P G V H S CRY +V S+LG V P
Sbjct: 223 RHPLPFSGVRGPLPTSDLSDLLLS--PPGPV---HGSHCRYSVTV-QAASRLGRVASEP 275
>UniRef50_Q754K3 Cluster: AFR069Cp; n=1; Eremothecium gossypii|Rep:
AFR069Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 308
Score = 33.1 bits (72), Expect = 9.4
Identities = 23/75 (30%), Positives = 31/75 (41%)
Frame = -3
Query: 725 RKRHASRREKGGQVSGKRQGRNRRAHEGAXQGETPGIFIVLSGFATSDLSVDFCDARQGG 546
R R A EK + G+ G R A G P + +L+G ++ D AR G
Sbjct: 89 RNRKAGHEEKRRREGGEGSGPAERKRGRAEPGALPQLAQLLNGVPEAEPPTD---ARPGS 145
Query: 545 GAYGKTPATRPFYGS 501
+G PA P Y S
Sbjct: 146 ALHGPGPARGPAYKS 160
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,178,666
Number of Sequences: 1657284
Number of extensions: 16587489
Number of successful extensions: 46249
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 43948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46214
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -