Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_M09
(882 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 33 0.012
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 28 0.33
EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calc... 26 1.7
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 26 1.7
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 33.1 bits (72), Expect = 0.012
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = -1
Query: 774 GXSGIXGPPAXPER---XGXPAXPGSRG-KXEEAPKNAKPPLPAGWP 646
G SG GPP P R G P PGS+G K + PP P G P
Sbjct: 66 GNSGPVGPPGAPGRDGMPGAPGLPGSKGVKGDPGLSMVGPPGPKGNP 112
Score = 27.5 bits (58), Expect = 0.57
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 774 GXSGIXGPPAXPERXGXPAXPGSRGK 697
G G GP P R G P PG +G+
Sbjct: 764 GLRGDVGPEGRPGRDGAPGLPGPKGE 789
Score = 25.4 bits (53), Expect = 2.3
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = -1
Query: 786 PXXWGXSGIXGPPAXPERXGXPAXPGSRG 700
P G G GPP P G PG +G
Sbjct: 139 PGEKGDLGTPGPPGYPGDVGPKGEPGPKG 167
Score = 25.0 bits (52), Expect = 3.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 701 PRLPGXAGXPXLSGXAGGPXXPLXPQXXG 787
P LPG G P G G P P P G
Sbjct: 130 PGLPGSLGYPGEKGDLGTPGPPGYPGDVG 158
Score = 25.0 bits (52), Expect = 3.1
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Frame = -1
Query: 774 GXSGIXGPPAXPERXGXPAXPGSRGKXEEA----PKNAKPPLPAGWPIX*XXKNLPHL 613
G G G P G PG +G+ E P+ PP P G+ K LP L
Sbjct: 678 GMVGEKGDRGLPGMSGLNGAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGLPGL 735
Score = 24.6 bits (51), Expect = 4.0
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = -1
Query: 774 GXSGIXGPPAXPERXGXPAXPGSRGKXEEAPKNAKPPLPAGWPIX*XXKNLPHLP 610
G G GPP P G G RG+ N+ P P G P P LP
Sbjct: 39 GAQGNAGPPGAPGPVGPRGLTGHRGE----KGNSGPVGPPGAPGRDGMPGAPGLP 89
Score = 24.6 bits (51), Expect = 4.0
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -1
Query: 786 PXXWGXSGIXGPPAXPERXGXPAXPGSRG 700
P G +GI G P P G G+RG
Sbjct: 733 PGLAGPAGIPGAPGAPGEMGLRGFEGARG 761
Score = 23.8 bits (49), Expect = 7.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +2
Query: 647 GHPAGRGGFAFLGASSXFPRLPGXAGXPXLSGXAGGP 757
G P +G GA P + G G P L G G P
Sbjct: 161 GEPGPKGPAGHPGAPGR-PGVDGVKGLPGLKGDIGAP 196
Score = 23.8 bits (49), Expect = 7.1
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -1
Query: 774 GXSGIXGPPAXPERXGXPAXPGSRG 700
G G+ GP P G P G RG
Sbjct: 731 GLPGLAGPAGIPGAPGAPGEMGLRG 755
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 28.3 bits (60), Expect = 0.33
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = -1
Query: 786 PXXWGXSGIXGPPAXPERXGXPAXPGSRGK--XEEAPKNAKPPLPAGWP 646
P G SG+ G P G PG RG+ + P PP P+G P
Sbjct: 600 PGRPGASGVPGERGYPGMPGEDGTPGLRGEPGPKGEPGLLGPPGPSGEP 648
Score = 27.1 bits (57), Expect = 0.76
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 774 GXSGIXGPPAXPERXGXPAXPGSRGKXEEAPKNAKPPLP 658
G G+ G P + G P PG G+ E + +P LP
Sbjct: 527 GFKGVMGTPGDAKE-GRPGAPGLPGRDGEKGEPGRPGLP 564
Score = 26.6 bits (56), Expect = 1.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 647 GHPAGRGGFAFLGASSXFPRLPGXAGXPXLSGXAGGPXXP 766
G P GR G + + +P +PG G P L G G P
Sbjct: 598 GEP-GRPGASGVPGERGYPGMPGEDGTPGLRGEPGPKGEP 636
Score = 26.2 bits (55), Expect = 1.3
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = -1
Query: 774 GXSGIXGPPAXPERXGXPAXPGSRGKXEEAPKNAKPPL 661
G G GP P G P G G+ E P + P+
Sbjct: 625 GLRGEPGPKGEPGLLGPPGPSGEPGRDAEIPMDQLKPI 662
Score = 25.8 bits (54), Expect = 1.7
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -1
Query: 774 GXSGIXGPPAXPERXGXPAXPGSRGKXEEAPKNAKPPLP 658
G G+ G P P G P PG+ G N LP
Sbjct: 151 GRDGLPGYPGIPGTNGVPGVPGAPGLAGRDGCNGTDGLP 189
Score = 25.8 bits (54), Expect = 1.7
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 774 GXSGIXGPPAXPERXGXPAXPGSRGKXEEAPKN 676
G SG+ G P G P G +G+ P+N
Sbjct: 190 GLSGLPGNPGPRGYAGIPGTKGEKGEPARHPEN 222
Score = 25.8 bits (54), Expect = 1.7
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 786 PXXWGXSGIXGPPAXPERXGXPAXPGSRGK 697
P G G G P P G P PG RG+
Sbjct: 240 PGPQGEVGPRGFPGRPGEKGVPGTPGVRGE 269
Score = 25.8 bits (54), Expect = 1.7
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -1
Query: 774 GXSGIXGPPAXPERXGXPAXPGSRGKXEEAPKNAKPPLP 658
G G G P P R G G RG+ E + LP
Sbjct: 305 GEKGDRGEPGEPGRSGEKGQAGDRGQVGERGHKGEKGLP 343
Score = 25.8 bits (54), Expect = 1.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 774 GXSGIXGPPAXPERXGXPAXPGSRG 700
G G GP P R G P PG G
Sbjct: 374 GLKGQSGPKGEPGRDGIPGQPGIAG 398
Score = 25.4 bits (53), Expect = 2.3
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -1
Query: 774 GXSGIXGPPAXPERXGXPAXPGSRGKXEEAPK 679
G +GI G P P + G P G K E K
Sbjct: 706 GEAGIDGAPGAPGKDGLPGRHGQTVKGEPGLK 737
Score = 24.2 bits (50), Expect = 5.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -1
Query: 786 PXXWGXSGIXGPPAXPERXGXPAXPGSRG 700
P G G G P G P PG RG
Sbjct: 174 PGLAGRDGCNGTDGLPGLSGLPGNPGPRG 202
Score = 24.2 bits (50), Expect = 5.3
Identities = 11/41 (26%), Positives = 16/41 (39%)
Frame = -1
Query: 822 YPPXFXWIXRXXPXXWGXSGIXGPPAXPERXGXPAXPGSRG 700
+P + + P G G+ GP G P PG +G
Sbjct: 219 HPENYNKGQKGEPGNDGLEGLPGPQGEVGPRGFPGRPGEKG 259
Score = 23.4 bits (48), Expect = 9.3
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +2
Query: 710 PGXAGXPXLSGXAGGPXXPLXPQXXG*XRXIHXKXGG 820
PG G P G G P P P G R + + GG
Sbjct: 543 PGAPGLPGRDGEKGEPGRPGLPGAKG-ERGLKGELGG 578
>EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calcium
channel beta subunitprotein.
Length = 466
Score = 25.8 bits (54), Expect = 1.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -1
Query: 774 GXSGIXGPPAXPERXGXPAXPGSRGKXEEAPKNAKPPL 661
G SG+ G A P R P PG A ++ K PL
Sbjct: 177 GASGVPG--AEPSRGSTPPTPGDDSDSMGASRHGKTPL 212
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 25.8 bits (54), Expect = 1.7
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -2
Query: 806 GG*XGXXXXXGGGAXXPVRPXARKXPEXXRSQGAEGXRKRPPKTQ 672
GG G G GA + K P +SQG G RKR K +
Sbjct: 920 GGGGGSGGEEGSGAPKERKRKGEKKPR--KSQGGGGSRKRKEKAR 962
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,264
Number of Sequences: 2352
Number of extensions: 12367
Number of successful extensions: 70
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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