Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_M03
         (963 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.12 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.48 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.6  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   4.5  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   4.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.9 bits (64), Expect = 0.12
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 744 PPPAXTXPXPXXPPPTTXAXGXXPPPS 824
           PPPA   P P  PPP+  A G    P+
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPA 607



 Score = 24.2 bits (50), Expect = 6.0
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +3

Query: 741 PPPPAXTXPXPXXPPPTTXAXGXXPP 818
           PPPP    P P    P     G  PP
Sbjct: 587 PPPPMGPPPSPLAGGPLGGPAGSRPP 612


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.48
 Identities = 20/55 (36%), Positives = 20/55 (36%)
 Frame = -2

Query: 665 GAXXGGXGGXXXXSXPRGXGGGPXXPPPGGXKXXGXGXXAXXXXACXXVGGGGRG 501
           GA  GG GG      P G GG    P PGG    G G             GGG G
Sbjct: 201 GAGGGGSGG----GAPGGGGGSSGGPGPGGG-GGGGGRDRDHRDRDREREGGGNG 250



 Score = 27.1 bits (57), Expect = 0.85
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = -2

Query: 851 GGSXXXTXGGGGGXAAXXXCGGXGXXWXRPR 759
           GGS     GGGGG +     GG G    R R
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGGGGRDR 235



 Score = 26.2 bits (55), Expect = 1.5
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -2

Query: 668 GGAXXGGXGGXXXXSXPRGXGGG 600
           GG   GG GG      P G GGG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGG 230


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -3

Query: 823 EGGGWXPXAXVVGGGXXGXGXVXAGGG 743
           EG G       +GGG  G G   AGGG
Sbjct: 548 EGAGRGGVGSGIGGGGGGGGGGRAGGG 574



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 851 GGSXXXTXGGGGGXAAXXXCGGXG 780
           GG    + G GGG A+    GG G
Sbjct: 683 GGGAGSSGGSGGGLASGSPYGGGG 706


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
 Frame = +3

Query: 765 PXPXXPPPTTXAXGXXPPPSTXXXXXRPALA--AXTSQXNPPXRXPP 899
           P P  PPP++ + G  P P T      P L+  A     N   R PP
Sbjct: 784 PPPPPPPPSSLSPGGVPRP-TVLQKLDPQLSEEAAAVGANVEQRVPP 829


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 17/56 (30%), Positives = 18/56 (32%)
 Frame = -2

Query: 668 GGAXXGGXGGXXXXSXPRGXGGGPXXPPPGGXKXXGXGXXAXXXXACXXVGGGGRG 501
           GG   G  G     S   G GGG      GG      G  +    A    GGG  G
Sbjct: 659 GGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGM---IGMHSVAAGAAVAAGGGVAG 711


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 20/72 (27%), Positives = 21/72 (29%)
 Frame = +3

Query: 741 PPPPAXTXPXPXXPPPTTXAXGXXPPPSTXXXXXRPALAAXTSQXNPPXRXPPXGLSTXT 920
           PP P      P  PP      G  PPP       RP          P    PP GL    
Sbjct: 86  PPRPGMIPGMPGAPPLLMGPNGPLPPP---MMGMRP-----PPMMVPTMGMPPMGLGMRP 137

Query: 921 XXRTXXPXXLTP 956
              +  P  L P
Sbjct: 138 PVMSAAPPQLNP 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,177
Number of Sequences: 2352
Number of extensions: 8738
Number of successful extensions: 68
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105843456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)