Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_L20
         (907 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...    33   1.9  
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...    33   1.9  
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...    33   1.9  
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...    33   1.9  
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.         31   4.3  
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.        31   4.3  
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.     31   4.3  

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +2

Query: 53  PVINXVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 202
           P+I+ V++           PKQPVIV               VGGACVL A
Sbjct: 99  PIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +2

Query: 53  PVINXVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 202
           P+I+ V++           PKQPVIV               VGGACVL A
Sbjct: 98  PIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 147


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +2

Query: 53  PVINXVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 202
           P+I+ V++           PKQPVIV               VGGACVL A
Sbjct: 99  PIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +2

Query: 53  PVINXVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 202
           P+I+ V++           PKQPVIV               VGGACVL A
Sbjct: 99  PIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
          Length = 1250

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 19/73 (26%), Positives = 22/73 (30%)
 Frame = +2

Query: 671  PKIXGYPRKKXVXXXXXKXPXXVKXPXXWRFSXXXXPPXXHPKXXPXIQXVGNPXGXXKX 850
            P +   P K        + P  VK    W+ S    P    P   P    V  P      
Sbjct: 876  PAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPV 935

Query: 851  PXXPPXXPPXXXP 889
            P  PP  PP   P
Sbjct: 936  PAPPPPPPPTASP 948


>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
          Length = 1250

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 19/73 (26%), Positives = 22/73 (30%)
 Frame = +2

Query: 671  PKIXGYPRKKXVXXXXXKXPXXVKXPXXWRFSXXXXPPXXHPKXXPXIQXVGNPXGXXKX 850
            P +   P K        + P  VK    W+ S    P    P   P    V  P      
Sbjct: 876  PAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPV 935

Query: 851  PXXPPXXPPXXXP 889
            P  PP  PP   P
Sbjct: 936  PAPPPPPPPTASP 948


>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
          Length = 1236

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 19/73 (26%), Positives = 22/73 (30%)
 Frame = +2

Query: 671  PKIXGYPRKKXVXXXXXKXPXXVKXPXXWRFSXXXXPPXXHPKXXPXIQXVGNPXGXXKX 850
            P +   P K        + P  VK    W+ S    P    P   P    V  P      
Sbjct: 862  PAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPV 921

Query: 851  PXXPPXXPPXXXP 889
            P  PP  PP   P
Sbjct: 922  PAPPPPPPPTASP 934


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,383,832
Number of Sequences: 237096
Number of extensions: 1039177
Number of successful extensions: 1603
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)