Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_L19
(897 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 140 6e-32
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 123 7e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 92 2e-17
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 71 3e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 53 9e-06
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.021
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 38 0.46
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.7
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 33 9.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 140 bits (338), Expect = 6e-32
Identities = 76/120 (63%), Positives = 82/120 (68%), Gaps = 6/120 (5%)
Frame = +1
Query: 481 SKRPGTVKRPRCWRFSIXSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 660
SK+ T R RFSI SAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 661 CRLPDTCPXFSFGKRGAFS*PTL*VSHSVXV-VR-----PXWAVFPTPRSXXPXAPYPVT 822
CRLPDTCP FS + F ++H+V + VR P WAV P APYPVT
Sbjct: 62 CRLPDTCPPFSLREAWRFL-----IAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVT 116
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 123 bits (296), Expect = 7e-27
Identities = 72/120 (60%), Positives = 77/120 (64%)
Frame = +1
Query: 313 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 492
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 493 GTVKRPRCWRFSIXSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 672
RPR RFSI SAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 92.3 bits (219), Expect = 2e-17
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +1
Query: 499 VKRPRCWRFSIXSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 660
V+ PR RFSI SAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 71.3 bits (167), Expect = 3e-11
Identities = 38/56 (67%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -2
Query: 737 DTYSVGYEKAPRFPK-EKXGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 573
DT SV YEKAPRFPK +K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 44 DTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 489 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 376
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 289 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 456
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 57.6 bits (133), Expect = 4e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +1
Query: 388 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIXSAPLTSITK 561
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 562 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 660
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 53.2 bits (122), Expect = 9e-06
Identities = 38/96 (39%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +2
Query: 602 IKIPGVSPWKLPRALSCSDPAAYRIPV-RLSPSGSVALSHSPRCRYXIRCXSXA-QXGLC 775
+KI VS LP ALSCS+PA RIPV S +GSVALSHS RC S A +
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 776 SPPPXXPXRXRLIR*LTALXQPRXETTLSPXGHXXW 883
PP P +T P ++T + G W
Sbjct: 92 KNPPFSPTAAPYP--VTVHLSPTRKSTQNATGSSHW 125
Score = 33.9 bits (74), Expect = 5.7
Identities = 28/84 (33%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Frame = +1
Query: 574 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPXFSFGKRGAFS*PT-L*VSHSVX 750
VR GETRQD K P P P FS A S + +S
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 751 VVRPXWAVFPTPRSXXPXAPYPVT 822
P WAV P APYPVT
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVT 106
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 91 DPDMIRYIDEFGQTTTRMQ 147
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 408 HSKAVIRLSTESGDNAGKNM 467
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.021
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +2
Query: 215 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 337
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 359 ERGSGRAPNTQTASPRALADSLMQ 288
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 37.5 bits (83), Expect = 0.46
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 639 VRSPVPTLPLTGYLSXFL 692
+RSPVPTLPLTGYLS FL
Sbjct: 1 MRSPVPTLPLTGYLSAFL 18
Score = 33.9 bits (74), Expect = 5.7
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 692 PSGSVALSHSPRCRY 736
PSGSVALSHS RCRY
Sbjct: 19 PSGSVALSHSSRCRY 33
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 498 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 376
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.5 bits (73), Expect = 7.5
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -1
Query: 249 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQIN 82
+MNA V + FIAA + +T + AFF L S G ++VSY VW ++
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDLH 77
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 33.1 bits (72), Expect = 9.9
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -1
Query: 660 GSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 487
GS+Q S+ G++P + GFA+ + +F +A GG + +P + P Y S P
Sbjct: 582 GSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 814,664,490
Number of Sequences: 1657284
Number of extensions: 16141489
Number of successful extensions: 42218
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 40259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42195
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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