Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_L19
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81547-3|CAB04461.1|  253|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z81547-3|CAB04461.1|  253|Caenorhabditis elegans Hypothetical
           protein F53F8.4 protein.
          Length = 253

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
 Frame = +1

Query: 352 PRSLTRCARSFGCGER--YQLTQRR*YGYPQNQGITQERTCEQKASKRPGTVKRPRCWRF 525
           PR    CA S+GCG    Y+L  R    Y   +G ++  T    +S+    V R R    
Sbjct: 42  PRPSCGCASSYGCGSYGCYRLRARGAKSYQPKRGRSRV-TVGGSSSEEAREVLRQRMAME 100

Query: 526 SI-XSAPLTSITKID----AQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPXF 690
            +     LTS  ++D    + +R  ++ Q     R F      C +     +LPD C   
Sbjct: 101 RVRRKEQLTSSEELDLVSPSVLRNSKSEQPINPDRAF----YECCI---DRKLPDAC--L 151

Query: 691 SFGKRGAFS*PTL 729
           S    GAF+ PTL
Sbjct: 152 SKCSFGAFTKPTL 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,225,801
Number of Sequences: 27780
Number of extensions: 368326
Number of successful extensions: 912
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)