Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_L17
         (890 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075304-1|AAL68171.1|  373|Drosophila melanogaster AT31643p pro...    31   1.6  
AE013599-1430|AAF58545.1|  373|Drosophila melanogaster CG13167-P...    31   1.6  
BT016079-1|AAV36964.1|  922|Drosophila melanogaster LD47749p pro...    30   4.9  
AY052114-1|AAK93538.1|  922|Drosophila melanogaster SD06427p pro...    30   4.9  
AE014297-1680|AAF54941.1|  922|Drosophila melanogaster CG9799-PA...    30   4.9  
AE014296-3383|AAF51617.2|  405|Drosophila melanogaster CG5078-PA...    29   6.5  

>AY075304-1|AAL68171.1|  373|Drosophila melanogaster AT31643p
           protein.
          Length = 373

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +1

Query: 247 GWKAGVIRAASLRDNKNKELQVLVEYDGVEWQRREWVAVYSRRTFRVFLVERTLV 411
           G   G ++ + +RD+  K L+ LVE+  +E+Q R   A   +   RV  +E  ++
Sbjct: 123 GLSCGGMQVSRIRDSYTKALKALVEFASLEYQVRMLEAASLQTNMRVNALEHVVI 177


>AE013599-1430|AAF58545.1|  373|Drosophila melanogaster CG13167-PA
           protein.
          Length = 373

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +1

Query: 247 GWKAGVIRAASLRDNKNKELQVLVEYDGVEWQRREWVAVYSRRTFRVFLVERTLV 411
           G   G ++ + +RD+  K L+ LVE+  +E+Q R   A   +   RV  +E  ++
Sbjct: 123 GLSCGGMQVSRIRDSYTKALKALVEFASLEYQVRMLEAASLQTNMRVNALEHVVI 177


>BT016079-1|AAV36964.1|  922|Drosophila melanogaster LD47749p
           protein.
          Length = 922

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +1

Query: 196 LAVSGLTKINVNRVSEWGWKAGVIRAASLRDNKNKELQVLVEYDG---VEWQRREWVAVY 366
           +AV GL   N+N+    G   G+++  S +   +K L  L   DG   +   R   +   
Sbjct: 499 MAVRGLASDNLNQTVISGCSEGLLKFWSFKGKVDKPLATLRLADGIALIRQHRESSMLAI 558

Query: 367 SRRTFRVFLVE 399
              TF++F+V+
Sbjct: 559 GLETFKIFVVD 569


>AY052114-1|AAK93538.1|  922|Drosophila melanogaster SD06427p
           protein.
          Length = 922

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +1

Query: 196 LAVSGLTKINVNRVSEWGWKAGVIRAASLRDNKNKELQVLVEYDG---VEWQRREWVAVY 366
           +AV GL   N+N+    G   G+++  S +   +K L  L   DG   +   R   +   
Sbjct: 499 MAVRGLASDNLNQTVISGCSEGLLKFWSFKGKVDKPLATLRLADGIALIRLHRESSMLAI 558

Query: 367 SRRTFRVFLVE 399
              TF++F+V+
Sbjct: 559 GLETFKIFVVD 569


>AE014297-1680|AAF54941.1|  922|Drosophila melanogaster CG9799-PA
           protein.
          Length = 922

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +1

Query: 196 LAVSGLTKINVNRVSEWGWKAGVIRAASLRDNKNKELQVLVEYDG---VEWQRREWVAVY 366
           +AV GL   N+N+    G   G+++  S +   +K L  L   DG   +   R   +   
Sbjct: 499 MAVRGLASDNLNQTVISGCSEGLLKFWSFKGKVDKPLATLRLADGIALIRQHRESSMLAI 558

Query: 367 SRRTFRVFLVE 399
              TF++F+V+
Sbjct: 559 GLETFKIFVVD 569


>AE014296-3383|AAF51617.2|  405|Drosophila melanogaster CG5078-PA
           protein.
          Length = 405

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 569 YQKWDAHLAGSESGVESVTLSALSAEAS 652
           Y+KW   LAG+ + + S+T  A+SA  S
Sbjct: 272 YEKWQMWLAGNVAALSSITFPAVSAYVS 299


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,859,941
Number of Sequences: 53049
Number of extensions: 762321
Number of successful extensions: 1559
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1559
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)