Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_L14
         (883 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071747-1|AAL49369.1|   58|Drosophila melanogaster RH56317p pro...    45   2e-04
AE014296-3726|AAN12206.1|   58|Drosophila melanogaster CG33169-P...    45   2e-04
AE014296-3725|AAO41287.1|  234|Drosophila melanogaster CG33169-P...    30   4.9  

>AY071747-1|AAL49369.1|   58|Drosophila melanogaster RH56317p
           protein.
          Length = 58

 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 19/52 (36%), Positives = 34/52 (65%)
 Frame = +1

Query: 94  GPVKXXARQKREXKQXFAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRPSTM 249
           G VK   +QK+E K    + + +I T+VLP + V+ + + ++VY+KTRP+ +
Sbjct: 6   GKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLVLFVYLKTRPAVL 57


>AE014296-3726|AAN12206.1|   58|Drosophila melanogaster CG33169-PA,
           isoform A protein.
          Length = 58

 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 19/52 (36%), Positives = 34/52 (65%)
 Frame = +1

Query: 94  GPVKXXARQKREXKQXFAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRPSTM 249
           G VK   +QK+E K    + + +I T+VLP + V+ + + ++VY+KTRP+ +
Sbjct: 6   GKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLVLFVYLKTRPAVL 57


>AE014296-3725|AAO41287.1|  234|Drosophila melanogaster CG33169-PB,
           isoform B protein.
          Length = 234

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +1

Query: 94  GPVKXXARQKREXKQXFAKMRKQIHTIVLPTVVVIFLLICVY 219
           G VK   +QK+E K    + + +I T+VLP + V+ + + V+
Sbjct: 6   GKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLFVH 47


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,083,499
Number of Sequences: 53049
Number of extensions: 389194
Number of successful extensions: 1061
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)