Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_L12
(895 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D25218-1|BAA04948.1| 399|Homo sapiens KIAA0112 protein. 201 3e-51
BC013043-1|AAH13043.1| 365|Homo sapiens RRS1 ribosome biogenesi... 201 3e-51
BC001811-1|AAH01811.1| 365|Homo sapiens RRS1 ribosome biogenesi... 201 3e-51
BC028355-1|AAH28355.1| 714|Homo sapiens Mdm4, transformed 3T3 c... 32 3.2
AF007130-1|AAC19149.1| 253|Homo sapiens unknown protein. 32 3.2
U73167-3|AAC02729.1| 417|Homo sapiens WUGSC:H_LUCA14.2 protein. 31 5.6
BC012892-1|AAH12892.1| 417|Homo sapiens hyaluronoglucosaminidas... 31 5.6
BC005896-1|AAH05896.1| 417|Homo sapiens hyaluronoglucosaminidas... 31 5.6
AF502912-1|AAM60778.1| 417|Homo sapiens hyaluronidase 3 protein. 31 5.6
AF502909-1|AAM60775.1| 387|Homo sapiens hyaluronidase 3 variant... 31 5.6
AF040710-1|AAC70915.1| 463|Homo sapiens hyaluronidase protein. 31 5.6
AF036035-1|AAD04257.1| 417|Homo sapiens hyaluronidase 3 protein. 31 5.6
BC113507-1|AAI13508.1| 1749|Homo sapiens ubiquitin protein ligas... 31 7.5
BC113505-1|AAI13506.1| 1749|Homo sapiens ubiquitin protein ligas... 31 7.5
AY061886-1|AAL32103.1| 1749|Homo sapiens ubiquitin ligase E3 alp... 31 7.5
AF525401-1|AAO14997.1| 1709|Homo sapiens UBR1 E3a ligase protein. 31 7.5
BC056667-1|AAH56667.1| 362|Homo sapiens CCDC18 protein protein. 30 9.9
AL139421-1|CAI22508.1| 1454|Homo sapiens coiled-coil domain cont... 30 9.9
>D25218-1|BAA04948.1| 399|Homo sapiens KIAA0112 protein.
Length = 399
Score = 201 bits (490), Expect = 3e-51
Identities = 100/196 (51%), Positives = 134/196 (68%), Gaps = 2/196 (1%)
Frame = +3
Query: 234 VNEILER-EQKKADKYKPITVEKHLELEFDLGSLLASDTND-LDIKTLKTNKDSYLLALT 407
V E+L + EQ +A+K + ITV K LEL+FDLG+LLASD N ++ ++ L AL
Sbjct: 40 VEELLAKAEQDEAEKLQRITVHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALA 99
Query: 408 RDNAQLLLNKVWELPTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQEFAXXXXXXX 587
RDN QLL+N++W+LPTER+EEAIV RLP+PTT LPR KP+P P+PLT+WQ+FA
Sbjct: 100 RDNTQLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRP 159
Query: 588 XXXXXLQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAK 767
L WDE +W +G+++ A + K WLIEVP N DP+ D + K+ K E+VAK
Sbjct: 160 KKKTNLVWDEVSGQWRRRWGYQR-ARDDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAK 218
Query: 768 NELQRLKNLARAKKVK 815
NEL RL+NLARA K++
Sbjct: 219 NELNRLRNLARAHKMQ 234
>BC013043-1|AAH13043.1| 365|Homo sapiens RRS1 ribosome biogenesis
regulator homolog (S. cerevisiae) protein.
Length = 365
Score = 201 bits (490), Expect = 3e-51
Identities = 100/196 (51%), Positives = 134/196 (68%), Gaps = 2/196 (1%)
Frame = +3
Query: 234 VNEILER-EQKKADKYKPITVEKHLELEFDLGSLLASDTND-LDIKTLKTNKDSYLLALT 407
V E+L + EQ +A+K + ITV K LEL+FDLG+LLASD N ++ ++ L AL
Sbjct: 6 VEELLAKAEQDEAEKLQRITVHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALA 65
Query: 408 RDNAQLLLNKVWELPTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQEFAXXXXXXX 587
RDN QLL+N++W+LPTER+EEAIV RLP+PTT LPR KP+P P+PLT+WQ+FA
Sbjct: 66 RDNTQLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRP 125
Query: 588 XXXXXLQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAK 767
L WDE +W +G+++ A + K WLIEVP N DP+ D + K+ K E+VAK
Sbjct: 126 KKKTNLVWDEVSGQWRRRWGYQR-ARDDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAK 184
Query: 768 NELQRLKNLARAKKVK 815
NEL RL+NLARA K++
Sbjct: 185 NELNRLRNLARAHKMQ 200
>BC001811-1|AAH01811.1| 365|Homo sapiens RRS1 ribosome biogenesis
regulator homolog (S. cerevisiae) protein.
Length = 365
Score = 201 bits (490), Expect = 3e-51
Identities = 100/196 (51%), Positives = 134/196 (68%), Gaps = 2/196 (1%)
Frame = +3
Query: 234 VNEILER-EQKKADKYKPITVEKHLELEFDLGSLLASDTND-LDIKTLKTNKDSYLLALT 407
V E+L + EQ +A+K + ITV K LEL+FDLG+LLASD N ++ ++ L AL
Sbjct: 6 VEELLAKAEQDEAEKLQRITVHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALA 65
Query: 408 RDNAQLLLNKVWELPTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQEFAXXXXXXX 587
RDN QLL+N++W+LPTER+EEAIV RLP+PTT LPR KP+P P+PLT+WQ+FA
Sbjct: 66 RDNTQLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRP 125
Query: 588 XXXXXLQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAK 767
L WDE +W +G+++ A + K WLIEVP N DP+ D + K+ K E+VAK
Sbjct: 126 KKKTNLVWDEVSGQWRRRWGYQR-ARDDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAK 184
Query: 768 NELQRLKNLARAKKVK 815
NEL RL+NLARA K++
Sbjct: 185 NELNRLRNLARAHKMQ 200
>BC028355-1|AAH28355.1| 714|Homo sapiens Mdm4, transformed 3T3 cell
double minute 1, p53 binding protein (mouse) protein.
Length = 714
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 687 IEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKKVKYQGWG 830
+++PQ+ + D E + E S + A + L+ + LARAKK K WG
Sbjct: 666 LQLPQH-EAFNDEDEDRLSEISARSAASSLRAFQTLARAKKRKENFWG 712
>AF007130-1|AAC19149.1| 253|Homo sapiens unknown protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 687 IEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKKVKYQGWG 830
+++PQ+ + D E + E S + A + L+ + LARAKK K WG
Sbjct: 205 LQLPQH-EAFNDEDEDRLSEISARSAASSLRAFQTLARAKKRKENFWG 251
>U73167-3|AAC02729.1| 417|Homo sapiens WUGSC:H_LUCA14.2 protein.
Length = 417
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 603 LQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQR 782
L W+E W +G ++ W +V +LDP +Y+ G E+ A+ ++
Sbjct: 126 LDWEEWCPLWAGNWGRRRAYQAASWAWAQQVFPDLDPQEQLYKAYTG--FEQAARALMED 183
Query: 783 LKNLARAKKVKYQGWGF 833
+A+A + + WGF
Sbjct: 184 TLRVAQALR-PHGLWGF 199
>BC012892-1|AAH12892.1| 417|Homo sapiens hyaluronoglucosaminidase 3
protein.
Length = 417
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 603 LQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQR 782
L W+E W +G ++ W +V +LDP +Y+ G E+ A+ ++
Sbjct: 126 LDWEEWCPLWAGNWGRRRAYQAASWAWAQQVFPDLDPQEQLYKAYTG--FEQAARALMED 183
Query: 783 LKNLARAKKVKYQGWGF 833
+A+A + + WGF
Sbjct: 184 TLRVAQALR-PHGLWGF 199
>BC005896-1|AAH05896.1| 417|Homo sapiens hyaluronoglucosaminidase 3
protein.
Length = 417
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 603 LQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQR 782
L W+E W +G ++ W +V +LDP +Y+ G E+ A+ ++
Sbjct: 126 LDWEEWCPLWAGNWGRRRAYQAASWAWAQQVFPDLDPQEQLYKAYTG--FEQAARALMED 183
Query: 783 LKNLARAKKVKYQGWGF 833
+A+A + + WGF
Sbjct: 184 TLRVAQALR-PHGLWGF 199
>AF502912-1|AAM60778.1| 417|Homo sapiens hyaluronidase 3 protein.
Length = 417
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 603 LQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQR 782
L W+E W +G ++ W +V +LDP +Y+ G E+ A+ ++
Sbjct: 126 LDWEEWCPLWAGNWGRRRAYQAASWAWAQQVFPDLDPQEQLYKAYTG--FEQAARALMED 183
Query: 783 LKNLARAKKVKYQGWGF 833
+A+A + + WGF
Sbjct: 184 TLRVAQALR-PHGLWGF 199
>AF502909-1|AAM60775.1| 387|Homo sapiens hyaluronidase 3 variant 1
protein.
Length = 387
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 603 LQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQR 782
L W+E W +G ++ W +V +LDP +Y+ G E+ A+ ++
Sbjct: 126 LDWEEWCPLWAGNWGRRRAYQAASWAWAQQVFPDLDPQEQLYKAYTG--FEQAARALMED 183
Query: 783 LKNLARAKKVKYQGWGF 833
+A+A + + WGF
Sbjct: 184 TLRVAQALR-PHGLWGF 199
>AF040710-1|AAC70915.1| 463|Homo sapiens hyaluronidase protein.
Length = 463
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 603 LQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQR 782
L W+E W +G ++ W +V +LDP +Y+ G E+ A+ ++
Sbjct: 126 LDWEEWCPLWAGNWGRRRAYQAASWAWAQQVFPDLDPQEQLYKAYTG--FEQAARALMED 183
Query: 783 LKNLARAKKVKYQGWGF 833
+A+A + + WGF
Sbjct: 184 TLRVAQALR-PHGLWGF 199
>AF036035-1|AAD04257.1| 417|Homo sapiens hyaluronidase 3 protein.
Length = 417
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 603 LQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQR 782
L W+E W +G ++ W +V +LDP +Y+ G E+ A+ ++
Sbjct: 126 LDWEEWCPLWAGNWGRRRAYQAASWAWAQQVFPDLDPQEQLYKAYTG--FEQAARALMED 183
Query: 783 LKNLARAKKVKYQGWGF 833
+A+A + + WGF
Sbjct: 184 TLRVAQALR-PHGLWGF 199
>BC113507-1|AAI13508.1| 1749|Homo sapiens ubiquitin protein ligase E3
component n-recognin 1 protein.
Length = 1749
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -2
Query: 450 EAPILYSVVAEHCHGSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNV 298
E L+ + H ++ M ++ CP L Q+ +V L +++PN+
Sbjct: 1339 EGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNI 1389
>BC113505-1|AAI13506.1| 1749|Homo sapiens ubiquitin protein ligase E3
component n-recognin 1 protein.
Length = 1749
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -2
Query: 450 EAPILYSVVAEHCHGSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNV 298
E L+ + H ++ M ++ CP L Q+ +V L +++PN+
Sbjct: 1339 EGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNI 1389
>AY061886-1|AAL32103.1| 1749|Homo sapiens ubiquitin ligase E3 alpha-I
protein.
Length = 1749
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -2
Query: 450 EAPILYSVVAEHCHGSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNV 298
E L+ + H ++ M ++ CP L Q+ +V L +++PN+
Sbjct: 1339 EGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNI 1389
>AF525401-1|AAO14997.1| 1709|Homo sapiens UBR1 E3a ligase protein.
Length = 1709
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -2
Query: 450 EAPILYSVVAEHCHGSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNV 298
E L+ + H ++ M ++ CP L Q+ +V L +++PN+
Sbjct: 1322 EGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNI 1372
>BC056667-1|AAH56667.1| 362|Homo sapiens CCDC18 protein protein.
Length = 362
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 663 AEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKK 809
AE+++N + + L Y+KK EK EKV E +NL +K
Sbjct: 289 AERQRNEALYNAEELSKAFQQYKKKVAEKLEKVQAEEEILERNLTNCEK 337
>AL139421-1|CAI22508.1| 1454|Homo sapiens coiled-coil domain
containing 18 protein.
Length = 1454
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 663 AEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKK 809
AE+++N + + L Y+KK EK EKV E +NL +K
Sbjct: 234 AERQRNEALYNAEELSKAFQQYKKKVAEKLEKVQAEEEILERNLTNCEK 282
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,646,516
Number of Sequences: 237096
Number of extensions: 2429281
Number of successful extensions: 5785
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5776
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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