Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_L12
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81035-7|CAB02731.1| 333|Caenorhabditis elegans Hypothetical pr... 127 1e-29
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 34 0.16
AL132863-10|CAN99717.1| 181|Caenorhabditis elegans Hypothetical... 32 0.64
AF068717-3|AAC17762.2| 361|Caenorhabditis elegans Serpentine re... 32 0.64
Z82263-6|CAJ76936.1| 383|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z82263-3|CAB62793.2| 451|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z82263-2|CAE46670.1| 445|Caenorhabditis elegans Hypothetical pr... 31 1.1
U53139-10|AAK18937.1| 381|Caenorhabditis elegans Serpentine rec... 31 1.5
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 30 1.9
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 30 1.9
AC024766-1|AAF59490.2| 160|Caenorhabditis elegans Hypothetical ... 29 3.4
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL023835-9|CAA19493.2| 397|Caenorhabditis elegans Hypothetical ... 29 4.5
AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical ... 29 4.5
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81544-2|CAB04434.1| 342|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 29 5.9
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 29 5.9
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 5.9
DQ150101-1|AAZ77787.1| 386|Caenorhabditis elegans synthetic mul... 28 7.8
AF025452-10|AAB70947.2| 386|Caenorhabditis elegans Hypothetical... 28 7.8
>Z81035-7|CAB02731.1| 333|Caenorhabditis elegans Hypothetical
protein C15H11.9 protein.
Length = 333
Score = 127 bits (306), Expect = 1e-29
Identities = 68/178 (38%), Positives = 102/178 (57%), Gaps = 1/178 (0%)
Frame = +3
Query: 279 KPITVEKHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTRDNAQLLLNKVWELPTE 458
K VEK ++ DLG+LL +D + ++ + L R N QLL N +W+L +
Sbjct: 4 KSTEVEKAIDPIIDLGNLLF-----IDREPIQGDASEGLEERARKNTQLLFNNIWQLEQK 58
Query: 459 RIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQEFAXXXXXXXXXXXXLQWDEQLQKWVP 638
R+EEAI+V LP T LPR K +P K TKW+++A +DE ++W P
Sbjct: 59 RVEEAIIVTLPPATYRLPREKRLPEKKEPTKWEKYAAEKGIEKRKKDKKVFDEATKEWKP 118
Query: 639 LYGFKKTAAEKEKNWLIEVPQNL-DPMTDMYEKKAGEKSEKVAKNELQRLKNLARAKK 809
YG+++ + K+WLIE+P N DP D + ++ +K E+VAKN++QR+KNLAR K
Sbjct: 119 TYGYRR-GNDDTKDWLIEIPDNAEDPNKDFFAERREKKKERVAKNDMQRMKNLARQMK 175
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3
Query: 609 WDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLD-PMTDMYEKKAGEKSEKVAK--NELQ 779
WDE+ ++WVP K E ++++ E N D+Y+K E EK AK E +
Sbjct: 93 WDEEKKEWVP----KAKQEEVNEDFIAEYQANYGVQYDDIYKKMDEELQEKAAKAQKEDE 148
Query: 780 RLKNLARAKKV 812
K R KKV
Sbjct: 149 EKKEKKRKKKV 159
>AL132863-10|CAN99717.1| 181|Caenorhabditis elegans Hypothetical
protein Y37H2A.14 protein.
Length = 181
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 733 RKPVKNQKRLQRMNYRD-LRISLEPKRLNTKG 825
+KP K QK+L++ +YR+ + +S EP+ + KG
Sbjct: 123 KKPKKTQKKLKKPSYREVVEVSTEPQTIEEKG 154
>AF068717-3|AAC17762.2| 361|Caenorhabditis elegans Serpentine
receptor, class w protein142 protein.
Length = 361
Score = 31.9 bits (69), Expect = 0.64
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = -1
Query: 820 WYLTFLALARFLSLCNSFFATFSDFS--PAFFSYISVIGSKFCGTSISQFFSFSAAVFLK 647
W L +AL R L + N + + P F I V+ FC SIS F + +F +
Sbjct: 130 WLLFSIALIRTLVIRNPMKTEYEKLTKPPTSFLAIIVVSLVFCPISISTFLEYD--IFSE 187
Query: 646 PYKGT 632
YK T
Sbjct: 188 KYKST 192
>Z82263-6|CAJ76936.1| 383|Caenorhabditis elegans Hypothetical
protein C47A4.2c protein.
Length = 383
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1
Query: 775 NSFFATFSDFSPAFFSYISVIGSKFCGTSIS 683
NSFF +DF PA +S VIG+ CGT S
Sbjct: 111 NSFFGMAADF-PAKYSNAVVIGTNICGTFTS 140
>Z82263-3|CAB62793.2| 451|Caenorhabditis elegans Hypothetical
protein C47A4.2b protein.
Length = 451
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1
Query: 775 NSFFATFSDFSPAFFSYISVIGSKFCGTSIS 683
NSFF +DF PA +S VIG+ CGT S
Sbjct: 179 NSFFGMAADF-PAKYSNAVVIGTNICGTFTS 208
>Z82263-2|CAE46670.1| 445|Caenorhabditis elegans Hypothetical
protein C47A4.2a protein.
Length = 445
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1
Query: 775 NSFFATFSDFSPAFFSYISVIGSKFCGTSIS 683
NSFF +DF PA +S VIG+ CGT S
Sbjct: 173 NSFFGMAADF-PAKYSNAVVIGTNICGTFTS 202
>U53139-10|AAK18937.1| 381|Caenorhabditis elegans Serpentine
receptor, class w protein69 protein.
Length = 381
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -1
Query: 835 RKPHPWYLTFLALARFLSLCNSFFATFSDFSPAFFSYISVIGSKFCGTSISQFF 674
R+ WY +AL RFL + + + S FSY+S+ + T ++ FF
Sbjct: 123 RRLSAWYGVMMALMRFLIVKFALNPKYDALSKPLFSYLSMFIAFLVSTGMTLFF 176
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Frame = +3
Query: 354 LDIKT---LKTNKDSYLLALTRDNAQLLLNKVWELPTERIEEAI---VVRLPQPTTILPR 515
LD KT L T +++ + Q +N V PTE A + LP P I P
Sbjct: 219 LDAKTMNALHTIREAATTSAQAAAIQDAINSVLSQPTEASPSAFGPPLAHLPAPVAIYPT 278
Query: 516 AKPVPVPKPLTKWQEFA 566
P P P P Q A
Sbjct: 279 PPPPPAPAPAAPQQASA 295
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Frame = +3
Query: 354 LDIKT---LKTNKDSYLLALTRDNAQLLLNKVWELPTERIEEAI---VVRLPQPTTILPR 515
LD KT L T +++ + Q +N V PTE A + LP P I P
Sbjct: 579 LDAKTMNALHTIREAATTSAQAAAIQDAINSVLSQPTEASPSAFGPPLAHLPAPVAIYPT 638
Query: 516 AKPVPVPKPLTKWQEFA 566
P P P P Q A
Sbjct: 639 PPPPPAPAPAAPQQASA 655
>AC024766-1|AAF59490.2| 160|Caenorhabditis elegans Hypothetical
protein Y39G10AL.1 protein.
Length = 160
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 225 MDIVNEILEREQKKADKYK 281
MDIVN+++ REQKK +Y+
Sbjct: 106 MDIVNDLMAREQKKRQEYQ 124
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 29.1 bits (62), Expect = 4.5
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +3
Query: 261 KKADKYKPITVEKHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTRDNAQLLLNKV 440
KK+ KP+ V+K +E TN + K L + D+ L
Sbjct: 437 KKSVPPKPVEVKK-VETPKPSQPPQVKPTNHTAVPATKPVAKKSLFSSDSDSDDDFLKSF 495
Query: 441 WEL-PTERIEEAIVVRLPQPTTILPRAKPVPVPKP 542
+ P + E VV+ P ++P+A +P PKP
Sbjct: 496 SKSKPVAKTESIPVVKKPIEPVVVPKAVDIPAPKP 530
>AL023835-9|CAA19493.2| 397|Caenorhabditis elegans Hypothetical
protein Y37A1B.10 protein.
Length = 397
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 856 RSLSXVXRKPHPWYLTFLALARFLSLCNSFFATFSDFSPAFFSYISVIGS 707
R+L + R+ W F+AL RFL + S A F+ S F+ ++I +
Sbjct: 128 RALGDILRRLSTWLALFMALFRFLIIQFSMNAKFNFVSTPKFALKTIIAT 177
>AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical
protein Y57G7A.6 protein.
Length = 883
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 8/49 (16%)
Frame = +3
Query: 255 EQKKADK-YKPITVEKHL-------ELEFDLGSLLASDTNDLDIKTLKT 377
E KK D +KP+T E H EL+ LG+LL + + + TLKT
Sbjct: 332 EMKKLDDLWKPVTTESHFYTMRQVTELQQHLGNLLPQNGIETSLTTLKT 380
>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical protein
F31C3.3 protein.
Length = 2029
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 657 TAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQRLKNL-ARAKKVKYQ 821
T+ ++ ++++ NL D Y+K+ GEK ++ + E Q ++ + RAK ++YQ
Sbjct: 1584 TSNSEQYEMVVDIVNNLALFVDPYKKEMGEKRRRL-RFECQIMEMVELRAKIMRYQ 1638
>Z81544-2|CAB04434.1| 342|Caenorhabditis elegans Hypothetical
protein F49C5.6 protein.
Length = 342
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = -2
Query: 408 GSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNVFRPLLVYIYLLSFVPFLISHL 235
G++ ++ + L+ LC RL + + + N+ R L + + + VPFL+ H+
Sbjct: 201 GTIVSSIIIVLTFGILCYRRLNAIVVTTMNSANLKNLQRQLFYALVIQTLVPFLLMHI 258
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/75 (20%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 603 LQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQR 782
L +D +Q++ L + +++ E+N ++ + DPM+++Y++K + + R
Sbjct: 1100 LTFDFFIQRFETLVLESQLSSQTEENIFVQDLMHTDPMSELYQRKVSKARSAIENASTAR 1159
Query: 783 --LKNLARAKKVKYQ 821
+++L + +K+Q
Sbjct: 1160 SIVRHLKQYDGMKHQ 1174
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/75 (20%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 603 LQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQR 782
L +D +Q++ L + +++ E+N ++ + DPM+++Y++K + + R
Sbjct: 1100 LTFDFFIQRFETLVLESQLSSQTEENIFVQDLMHTDPMSELYQRKVSKARSAIENASTAR 1159
Query: 783 --LKNLARAKKVKYQ 821
+++L + +K+Q
Sbjct: 1160 SIVRHLKQYDGMKHQ 1174
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/75 (20%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 603 LQWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNELQR 782
L +D +Q++ L + +++ E+N ++ + DPM+++Y++K + + R
Sbjct: 1103 LTFDFFIQRFETLVLESQLSSQTEENIFVQDLMHTDPMSELYQRKVSKARSAIENASTAR 1162
Query: 783 --LKNLARAKKVKYQ 821
+++L + +K+Q
Sbjct: 1163 SIVRHLKQYDGMKHQ 1177
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -1
Query: 484 RTTMASSILSVGSSHTLFSSS*ALSRVNASKYESL 380
RT +S+ LS GSS SSS A +V++SK ES+
Sbjct: 1065 RTHQSSNSLSTGSSLPTSSSSSAPVKVSSSKIESM 1099
>DQ150101-1|AAZ77787.1| 386|Caenorhabditis elegans synthetic
multivulva protein LIN-8 protein.
Length = 386
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 606 QWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNEL 776
Q + + +W YGF + + + W ++ ++LD + + ++A + EKV EL
Sbjct: 139 QVEAYMWRW-EFYGFIRYYRDYTQRWEADLLKDLDVVLGLEARRASKNMEKVDSGEL 194
>AF025452-10|AAB70947.2| 386|Caenorhabditis elegans Hypothetical
protein B0454.1 protein.
Length = 386
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 606 QWDEQLQKWVPLYGFKKTAAEKEKNWLIEVPQNLDPMTDMYEKKAGEKSEKVAKNEL 776
Q + + +W YGF + + + W ++ ++LD + + ++A + EKV EL
Sbjct: 139 QVEAYMWRW-EFYGFIRYYRDYTQRWEADLLKDLDVVLGLEARRASKNMEKVDSGEL 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,166,544
Number of Sequences: 27780
Number of extensions: 383713
Number of successful extensions: 1452
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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