Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_L11
         (885 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D555DD Cluster: PREDICTED: similar to CG1074-PA;...    77   8e-13
UniRef50_Q960G1 Cluster: SD03208p; n=6; Endopterygota|Rep: SD032...    60   7e-08
UniRef50_Q7Z4G4 Cluster: tRNA guanosine-2'-O-methyltransferase T...    53   1e-05
UniRef50_Q12463 Cluster: tRNA guanosine-2'-O-methyltransferase T...    44   0.007
UniRef50_UPI0000498BE7 Cluster: conserved hypothetical protein; ...    43   0.012
UniRef50_Q7RZ67 Cluster: Putative uncharacterized protein NCU044...    39   0.19 
UniRef50_Q0CR31 Cluster: NAD-dependent histone deacetylase SIR2;...    38   0.45 
UniRef50_Q9N4H1 Cluster: Putative uncharacterized protein; n=2; ...    37   0.59 
UniRef50_A4S984 Cluster: Predicted protein; n=1; Ostreococcus lu...    34   5.5  
UniRef50_Q6ZI84 Cluster: RNA methylase-like protein; n=3; Oryza ...    33   9.7  

>UniRef50_UPI0000D555DD Cluster: PREDICTED: similar to CG1074-PA;
           n=2; Endopterygota|Rep: PREDICTED: similar to CG1074-PA
           - Tribolium castaneum
          Length = 464

 Score = 76.6 bits (180), Expect = 8e-13
 Identities = 31/62 (50%), Positives = 45/62 (72%)
 Frame = +3

Query: 177 KMWRRYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIA 356
           K W++YLLWFA EH++FR  EI+S+LS+F+I ++  ++P    PYWIVE  SE   K++ 
Sbjct: 3   KPWKKYLLWFAQEHIEFRFEEIDSLLSMFQIKMRHFKEPDNTAPYWIVEFESESDLKRLV 62

Query: 357 SR 362
           SR
Sbjct: 63  SR 64


>UniRef50_Q960G1 Cluster: SD03208p; n=6; Endopterygota|Rep: SD03208p
           - Drosophila melanogaster (Fruit fly)
          Length = 488

 Score = 60.1 bits (139), Expect = 7e-08
 Identities = 25/60 (41%), Positives = 39/60 (65%)
 Frame = +3

Query: 183 WRRYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASR 362
           WR+++LWFA EHVDFR  E +S++ +F + ++ + +    KP+W+VE    D A   ASR
Sbjct: 4   WRKFILWFAQEHVDFRVQEFDSLVKMFGLQVRRLTEH-TRKPFWLVEFRDTDTALLYASR 62


>UniRef50_Q7Z4G4 Cluster: tRNA guanosine-2'-O-methyltransferase
           TRM11 homolog; n=41; Euteleostomi|Rep: tRNA
           guanosine-2'-O-methyltransferase TRM11 homolog - Homo
           sapiens (Human)
          Length = 463

 Score = 52.8 bits (121), Expect = 1e-05
 Identities = 24/68 (35%), Positives = 39/68 (57%)
 Frame = +3

Query: 189 RYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASRVC 368
           RYLL  A EH++FR  EI S+L LF       ++   + P+WI+ +PSED A+ +  R  
Sbjct: 9   RYLLLMAQEHLEFRLPEIKSLLLLFGGQFASSQETYGKSPFWILSIPSEDIARNLMKRTV 68

Query: 369 FDEKLYRI 392
             + ++ +
Sbjct: 69  CAKSIFEL 76


>UniRef50_Q12463 Cluster: tRNA guanosine-2'-O-methyltransferase
           TRM11; n=12; Saccharomycetales|Rep: tRNA
           guanosine-2'-O-methyltransferase TRM11 - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 433

 Score = 43.6 bits (98), Expect = 0.007
 Identities = 21/67 (31%), Positives = 36/67 (53%)
 Frame = +3

Query: 186 RRYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASRV 365
           ++YLL+    H++FR AE+ S+  L+ + I F +      P++IVEL ++  AK    R 
Sbjct: 2   KKYLLYMVQVHLNFRRAELESLADLYNLSIDFSQYDA-NSPFFIVELENDQQAKDWIKRS 60

Query: 366 CFDEKLY 386
                +Y
Sbjct: 61  ILTRGIY 67


>UniRef50_UPI0000498BE7 Cluster: conserved hypothetical protein;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
           hypothetical protein - Entamoeba histolytica HM-1:IMSS
          Length = 479

 Score = 42.7 bits (96), Expect = 0.012
 Identities = 24/71 (33%), Positives = 36/71 (50%)
 Frame = +3

Query: 180 MWRRYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIAS 359
           ++ + L+ F   H DFR  E NS+L LF++  ++  K  L+  Y      S D  KKI S
Sbjct: 41  LFMKVLIRFYESHPDFRFGEFNSLLRLFQVKCEYDPK-TLDNVYMYATFESLDDIKKICS 99

Query: 360 RVCFDEKLYRI 392
           R    + +Y I
Sbjct: 100 RSVLIKTVYEI 110


>UniRef50_Q7RZ67 Cluster: Putative uncharacterized protein
           NCU04407.1; n=3; Sordariomycetes|Rep: Putative
           uncharacterized protein NCU04407.1 - Neurospora crassa
          Length = 469

 Score = 38.7 bits (86), Expect = 0.19
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +3

Query: 192 YLLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASR 362
           YL+ F+  H  FR  EI ++  +  I +K +    LE P+ IV LPS   A+++ +R
Sbjct: 6   YLIRFSQSHETFRLPEIEALAIVEGIDLKVVSYS-LESPFCIVSLPSASAARRLIAR 61


>UniRef50_Q0CR31 Cluster: NAD-dependent histone deacetylase SIR2;
           n=2; Pezizomycotina|Rep: NAD-dependent histone
           deacetylase SIR2 - Aspergillus terreus (strain NIH 2624)
          Length = 1068

 Score = 37.5 bits (83), Expect = 0.45
 Identities = 20/67 (29%), Positives = 35/67 (52%)
 Frame = +3

Query: 192 YLLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASRVCF 371
           YL+ FA  H  FR  EI ++  L  I ++ +       PY +V+L SED A+ + +R   
Sbjct: 516 YLIRFAQSHESFRRPEIEALADLAGIALEILFYDG-SSPYCLVKLQSEDDARALITRSIL 574

Query: 372 DEKLYRI 392
            + ++ +
Sbjct: 575 AKDIFEL 581


>UniRef50_Q9N4H1 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 432

 Score = 37.1 bits (82), Expect = 0.59
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +3

Query: 195 LLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASR 362
           L+ F+  HVDFR AE  +I S+F I +   EK       +IV   S    +K+ SR
Sbjct: 5   LVIFSQSHVDFRIAEFEAICSMFSIKVDLSEKLNTTDHMFIVNFESHLEVRKLLSR 60


>UniRef50_A4S984 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 469

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +3

Query: 294 CLEKPYWIVELPSEDCAKKIASR 362
           C E P+W VELP E  A+ IASR
Sbjct: 20  CEETPFWYVELPDERTARAIASR 42


>UniRef50_Q6ZI84 Cluster: RNA methylase-like protein; n=3; Oryza
           sativa|Rep: RNA methylase-like protein - Oryza sativa
           subsp. japonica (Rice)
          Length = 252

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
 Frame = +3

Query: 180 MWRRYLLWFAHEHVDFRHAEINSILSLF-------KIPIKFIEKPCLEKPYWIVELPSED 338
           MW  YL  F H  +D+R  E+ S+  LF        +  +  E   ++ P+ +V LP ++
Sbjct: 1   MW--YLCVFYHRLLDYRRPEVQSLAELFGGPGAGDAVEWRMPENHHVDSPFHLVRLPGDE 58

Query: 339 -CAKKIASRVCFDEKLYRI 392
             A +IA+R    + +Y +
Sbjct: 59  RLAAQIANRSLLVKGIYEL 77


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,132,429
Number of Sequences: 1657284
Number of extensions: 8095960
Number of successful extensions: 15608
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15606
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)