Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_L11
         (885 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC056878-1|AAH56878.1|  463|Homo sapiens tRNA methyltransferase ...    53   2e-06
AL035689-8|CAI42394.1|  458|Homo sapiens chromosome 6 open readi...    53   2e-06
AF532977-1|AAQ10284.1|  463|Homo sapiens putative RNA methylase ...    53   2e-06
AF182423-1|AAG14959.1|  257|Homo sapiens MDS024 protein.               53   2e-06
AK023791-1|BAB14681.1|  348|Homo sapiens protein ( Homo sapiens ...    30   9.7  
AB023136-1|BAA76763.1|  710|Homo sapiens KIAA0919 protein protein.     30   9.7  

>BC056878-1|AAH56878.1|  463|Homo sapiens tRNA methyltransferase 11
           homolog (S. cerevisiae) protein.
          Length = 463

 Score = 52.8 bits (121), Expect = 2e-06
 Identities = 24/68 (35%), Positives = 39/68 (57%)
 Frame = +3

Query: 189 RYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASRVC 368
           RYLL  A EH++FR  EI S+L LF       ++   + P+WI+ +PSED A+ +  R  
Sbjct: 9   RYLLLMAQEHLEFRLPEIKSLLLLFGGQFASSQETYGKSPFWILSIPSEDIARNLMKRTV 68

Query: 369 FDEKLYRI 392
             + ++ +
Sbjct: 69  CAKSIFEL 76


>AL035689-8|CAI42394.1|  458|Homo sapiens chromosome 6 open reading
           frame 75 protein.
          Length = 458

 Score = 52.8 bits (121), Expect = 2e-06
 Identities = 24/68 (35%), Positives = 39/68 (57%)
 Frame = +3

Query: 189 RYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASRVC 368
           RYLL  A EH++FR  EI S+L LF       ++   + P+WI+ +PSED A+ +  R  
Sbjct: 9   RYLLLMAQEHLEFRLPEIKSLLLLFGGQFASSQETYGKSPFWILSIPSEDIARNLMKRTV 68

Query: 369 FDEKLYRI 392
             + ++ +
Sbjct: 69  CAKSIFEL 76


>AF532977-1|AAQ10284.1|  463|Homo sapiens putative RNA methylase
           protein.
          Length = 463

 Score = 52.8 bits (121), Expect = 2e-06
 Identities = 24/68 (35%), Positives = 39/68 (57%)
 Frame = +3

Query: 189 RYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASRVC 368
           RYLL  A EH++FR  EI S+L LF       ++   + P+WI+ +PSED A+ +  R  
Sbjct: 9   RYLLLMAQEHLEFRLPEIKSLLLLFGGQFASSQETYGKSPFWILSIPSEDIARNLMKRTV 68

Query: 369 FDEKLYRI 392
             + ++ +
Sbjct: 69  CAKSIFEL 76


>AF182423-1|AAG14959.1|  257|Homo sapiens MDS024 protein.
          Length = 257

 Score = 52.8 bits (121), Expect = 2e-06
 Identities = 24/68 (35%), Positives = 39/68 (57%)
 Frame = +3

Query: 189 RYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASRVC 368
           RYLL  A EH++FR  EI S+L LF       ++   + P+WI+ +PSED A+ +  R  
Sbjct: 9   RYLLLMAQEHLEFRLPEIKSLLLLFGGQFASSQETYGKSPFWILSIPSEDIARNLMKRTV 68

Query: 369 FDEKLYRI 392
             + ++ +
Sbjct: 69  CAKSIFEL 76


>AK023791-1|BAB14681.1|  348|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13729 fis, clone PLACE3000121, weakly similar to
           VESICULAR TRAFFIC CONTROL PROTEIN SEC15. ).
          Length = 348

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = +1

Query: 163 VYLKLKCGGDIYYGSLTNTLISDMLKSIVFCPYSKYPSNSLRNRVWRSRIGL*SSLQKIV 342
           +Y  LK   D++   L++T + DM++       ++  SNSL+N + R  IGL   +Q I+
Sbjct: 42  IYACLKFSEDLH---LSSTEVDDMIRKSTNLLLTRTLSNSLQNVIKRKNIGLTELVQIII 98


>AB023136-1|BAA76763.1|  710|Homo sapiens KIAA0919 protein protein.
          Length = 710

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = +1

Query: 163 VYLKLKCGGDIYYGSLTNTLISDMLKSIVFCPYSKYPSNSLRNRVWRSRIGL*SSLQKIV 342
           +Y  LK   D++   L++T + DM++       ++  SNSL+N + R  IGL   +Q I+
Sbjct: 543 IYACLKFSEDLH---LSSTEVDDMIRKSTNLLLTRTLSNSLQNVIKRKNIGLTELVQIII 599


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,704,236
Number of Sequences: 237096
Number of extensions: 1244573
Number of successful extensions: 1634
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)