Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_L11
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024200-17|AAF36002.2|  432|Caenorhabditis elegans Hypothetical...    37   0.017
Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>AC024200-17|AAF36002.2|  432|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.1 protein.
          Length = 432

 Score = 37.1 bits (82), Expect = 0.017
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +3

Query: 195 LLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASR 362
           L+ F+  HVDFR AE  +I S+F I +   EK       +IV   S    +K+ SR
Sbjct: 5   LVIFSQSHVDFRIAEFEAICSMFSIKVDLSEKLNTTDHMFIVNFESHLEVRKLLSR 60


>Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical
           protein ZK856.9 protein.
          Length = 455

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +1

Query: 148 IHGTNVYLKLKCGGDIYYGSLTNTLISDMLKSIVFCPYSK 267
           I   NVY+++    + YYG +T++ I +M ++ V   + K
Sbjct: 292 IDDVNVYMEVHANPERYYGIITDSTILEMTRTRVVADFPK 331


>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical
           protein F22G12.5 protein.
          Length = 2396

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +3

Query: 132 NRNTKNSWN*CVLEVKMWRRYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEK 290
           + ++ N WN    E K  R    +F  + +DF +++       F   +KF+EK
Sbjct: 369 SEDSSNCWNSANFEPKKLRNCTFFFGRKRLDFYYSKTRKSFE-FSENLKFLEK 420


>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 250  FCPYSKYPSNSLRNRVWRSRIGL*SSLQKI 339
            F P    P N  +N  WRSR  L S L K+
Sbjct: 948  FFPIGAQPGNQAQNGDWRSRFELISQLSKL 977


>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 250  FCPYSKYPSNSLRNRVWRSRIGL*SSLQKI 339
            F P    P N  +N  WRSR  L S L K+
Sbjct: 1074 FFPIGAQPGNQAQNGDWRSRFELISQLSKL 1103


>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 250  FCPYSKYPSNSLRNRVWRSRIGL*SSLQKI 339
            F P    P N  +N  WRSR  L S L K+
Sbjct: 948  FFPIGAQPGNQAQNGDWRSRFELISQLSKL 977


>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 250  FCPYSKYPSNSLRNRVWRSRIGL*SSLQKI 339
            F P    P N  +N  WRSR  L S L K+
Sbjct: 1074 FFPIGAQPGNQAQNGDWRSRFELISQLSKL 1103


>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical
           protein F22G12.5 protein.
          Length = 2396

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +3

Query: 132 NRNTKNSWN*CVLEVKMWRRYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEK 290
           + ++ N WN    E K  R    +F  + +DF +++       F   +KF+EK
Sbjct: 369 SEDSSNCWNSANFEPKKLRNCTFFFGRKRLDFYYSKTRKSFE-FSENLKFLEK 420


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,256,119
Number of Sequences: 27780
Number of extensions: 211740
Number of successful extensions: 418
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)