Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_L06
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170...    31   1.6  
11_03_0084 + 9696368-9696554,9696648-9696718,9696821-9696901,969...    29   6.6  
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039...    29   6.6  

>03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,
            1702358-1702426,1702543-1702657,1702740-1702811,
            1702918-1703016,1703148-1703219,1703394-1703465,
            1704940-1705154,1705277-1705495,1705792-1707076,
            1707270-1707398
          Length = 1068

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +3

Query: 207  SPAKPPTRSPRTVELRKDGDEYNLVTSSTFKTTEMKFKPGE-EFEE-DRADGAKVKSVCT 380
            SPA     SP+  E R D   YNL    +F++ E  F P E  F   D  + +K ++V  
Sbjct: 970  SPAYTSGFSPKFSESRDDSSSYNLGRFDSFRSQESGFFPQESRFSRFDSINNSKGENVTG 1029

Query: 381  FE 386
            F+
Sbjct: 1030 FD 1031


>11_03_0084 +
           9696368-9696554,9696648-9696718,9696821-9696901,
           9697139-9697206,9697335-9697437,9700422-9700567,
           9700686-9700803,9701693-9701797,9702333-9702434,
           9702518-9702655,9703475-9703603,9703682-9703762,
           9703883-9703957,9704861-9705028,9705125-9705242,
           9705345-9705409,9705547-9705637,9705801-9705885,
           9706006-9706084,9706317-9706414,9707029-9707137,
           9707224-9707292,9707770-9707835,9707952-9708041,
           9708416-9708526
          Length = 850

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 455 GPEEMKAVMTAKDVTCTRVYKVQ*KDSTPRSGVGAADSRTS 577
           G + ++  M AKD T  +V +V  KD    S VG ADS+ +
Sbjct: 159 GMDVVEMAMWAKDNTTVKVTQVSTKDGPIESLVGEADSQVA 199


>02_05_0484 -
           29401195-29401404,29401572-29401755,29401866-29403973,
           29404320-29404403,29404507-29404777,29404864-29405117,
           29405513-29405722,29406357-29406503
          Length = 1155

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +3

Query: 240 TVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEED 344
           T +L+K+ DEY + ++S  + TE   K  ++FEE+
Sbjct: 477 TAQLKKEIDEYRMRSNSLSEETEDLRKQRQKFEEE 511


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,559,731
Number of Sequences: 37544
Number of extensions: 425509
Number of successful extensions: 918
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)