Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_L06
         (893 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    58   4e-10
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   4.1  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   5.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   5.4  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   7.2  

>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 58.0 bits (134), Expect = 4e-10
 Identities = 30/62 (48%), Positives = 35/62 (56%)
 Frame = +3

Query: 240 TVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKAP 419
           TVEL K+GDEY   T S  +T         EF+E+  DG  VKSVCTF+GN L   QK  
Sbjct: 69  TVELVKNGDEYTFNTLSPSRTRRSSSSWAMEFDEETVDGRMVKSVCTFDGNKLIHEQKGE 128

Query: 420 XR 425
            R
Sbjct: 129 KR 130



 Score = 48.4 bits (110), Expect = 3e-07
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = +2

Query: 137 GKKYKMTSSENFDEFMKTIGVGLITRKAANAVTP 238
           GKKYKM  SE FD++M  +GVG++ RK  N+++P
Sbjct: 35  GKKYKMEKSEGFDDYMLALGVGMVLRKLGNSISP 68


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = -2

Query: 841 SAIFLKIKTXLWLNI--NNERIFEY 773
           + +F K+   LWLNI  N+  +F+Y
Sbjct: 540 AGLFTKLPNLLWLNISDNHLEVFDY 564


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 244  TVRGDRVGGFAGDQTHA 194
            T+ G   G FAGD+TH+
Sbjct: 985  TIGGSDDGSFAGDKTHS 1001


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 244  TVRGDRVGGFAGDQTHA 194
            T+ G   G FAGD+TH+
Sbjct: 983  TIGGSDDGSFAGDKTHS 999


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = -3

Query: 789 NVFLNTINASRACAPLLLPWSLNLFKFRHRHSLLQFER*TMTDVKT 652
           ++ + TI+ ++AC   L    +    F     + Q+ER   T ++T
Sbjct: 630 HIVVETIDTAKACIEFLKQHDIGRASFIALEKIQQYERNCHTQIQT 675


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,700
Number of Sequences: 2352
Number of extensions: 14534
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)