Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_L06
         (893 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    75   9e-16
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    36   7e-04
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    36   7e-04
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    27   0.23 
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    26   0.53 
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   5.0  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 74.9 bits (176), Expect = 9e-16
 Identities = 36/57 (63%), Positives = 42/57 (73%)
 Frame = +3

Query: 243 VELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 413
           VEL ++   Y L T+S FK TE+KFK GEEFEE+  DG KVKSVCT +GN L QVQK
Sbjct: 41  VELTENNGLYTLKTTSPFKNTEIKFKLGEEFEEETVDGRKVKSVCTLDGNKLIQVQK 97



 Score = 57.6 bits (133), Expect = 1e-10
 Identities = 22/37 (59%), Positives = 33/37 (89%)
 Frame = +2

Query: 128 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTP 238
           +F+GK+YK+ SSENFD+FMK +GVG++TRK  ++V+P
Sbjct: 3   DFLGKRYKLYSSENFDDFMKALGVGIMTRKVGSSVSP 39



 Score = 36.3 bits (80), Expect = 4e-04
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 452 FGPEEMKAVMTAKDVTCTRVYKVQ 523
           F   EMKA+M   D+ CTRVYK+Q
Sbjct: 108 FSSTEMKAIMKVDDIICTRVYKIQ 131


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 35.5 bits (78), Expect = 7e-04
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +3

Query: 234 PR-TVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE--DRADGAKVKSVCTFEGNTLK 401
           PR + EL K+GDE+   +SS   T    FK    FEE        K ++V + EGNT K
Sbjct: 33  PRPSFELSKNGDEWTFTSSSGDNTYTKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFK 91



 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 128 EFVGKKYKMTSSENFDEFMKTIG 196
           +F GK ++  S  NF+EF K +G
Sbjct: 1   QFEGK-FQFVSQNNFEEFAKVLG 22


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 35.5 bits (78), Expect = 7e-04
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +3

Query: 234 PR-TVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE--DRADGAKVKSVCTFEGNTLK 401
           PR + EL K+GDE+   +SS   T    FK    FEE        K ++V + EGNT K
Sbjct: 35  PRPSFELSKNGDEWTFTSSSGDNTYTKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFK 93



 Score = 25.0 bits (52), Expect = 0.93
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 125 MEFVGKKYKMTSSENFDEFMKTIG 196
           ++F GK ++  S  NF+EF K +G
Sbjct: 2   VQFEGK-FQFVSQNNFEEFAKVLG 24


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 749 AHAREAFIVFKNTFIVYIKPKXRFDLQEDR-TRCFHCVLINVF 874
           +H   AFI +   F +Y++P   F L  ++    F+  +I +F
Sbjct: 121 SHPTAAFISYGTLFFIYVQPSATFSLDLNKVVSVFYTAVIPMF 163


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
 Frame = +2

Query: 749 AHAREAFIVFKNTFIVYIKPKXRFDLQEDR-TRCFHCVLI---NVFFC 880
           +H   AFI +   F +Y+ P   F L  ++    F+  +I   N F C
Sbjct: 122 SHPTAAFISYGTLFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPFIC 169


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 313 FISVVLKVEEVTKLYSSPSLRSSTV 239
           FIS+++  +E+  + +SP L + T+
Sbjct: 9   FISLIILNDEIYNIIASPQLNNPTL 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,982
Number of Sequences: 438
Number of extensions: 4560
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)