Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_L05
(905 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 79 2e-13
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 66 9e-10
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 56 9e-07
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 56 2e-06
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 51 4e-05
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 46 0.001
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 46 0.001
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 40 0.066
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 37 0.62
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 78.6 bits (185), Expect = 2e-13
Identities = 39/59 (66%), Positives = 45/59 (76%)
Frame = +2
Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQE 352
+ LRVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYKPL + ++
Sbjct: 29 SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKK 87
Score = 54.8 bits (126), Expect = 3e-06
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +3
Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
R KKTRAMR+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 84 RPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 66.5 bits (155), Expect = 9e-10
Identities = 33/54 (61%), Positives = 39/54 (72%)
Frame = +2
Query: 182 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFK 343
LRV+KVTGG ASKLSKIRVVRK IAR+ V +Q K LR Y + KYKP+ +
Sbjct: 31 LRVSKVTGGAASKLSKIRVVRKNIARLLTVINQTQKQELRKFYADHKYKPIDLR 84
Score = 36.3 bits (80), Expect = 1.1
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
R KKTRA+R+ LT HE +++ K+ K R +AVKA
Sbjct: 84 RLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFAVKA 123
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 57.6 bits (133), Expect = 4e-07
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = +2
Query: 179 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQE 352
NLRV KV GG +SK+ +I +RK IARV V +QK + NLR YK K PL ++++
Sbjct: 103 NLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQKQRANLREFYKGKSQIPLDLRAKK 160
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 56.4 bits (130), Expect = 9e-07
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +2
Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQ 349
+ LR++K G A K SKI VRK +ARV VY+QK K+ LR YKNKK+KP + +
Sbjct: 29 SGLRISKALGNSA-KNSKIHGVRKNVARVLTVYNQKRKMELRQLYKNKKFKPYNLRKK 85
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/87 (35%), Positives = 46/87 (52%)
Frame = +2
Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQED 355
+ LRV K+ G +SK +I VRK+IARV V + + LR YKNKKY PL + +
Sbjct: 92 SQLRVQKIAAGASSKTQRIHDVRKSIARVLTVINANQRAQLRLFYKNKKYTPLDLRPRLT 151
Query: 356 PCYAQGSY*TRSKDQDEERDQKEISLP 436
+ + + E++ +KEI P
Sbjct: 152 RALRRRLTKHEATLKTEKQRKKEIHFP 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3
Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 458
R + TRA+R+ LTKHEA +KT K+ +K+ FP R YAVK
Sbjct: 147 RPRLTRALRRRLTKHEATLKTEKQRKKEIHFPQRKYAVK 185
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 51.2 bits (117), Expect = 4e-05
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +2
Query: 185 RVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFK 343
RV+KVT SKLSKI +VRKA+A+V VY+Q+ K R YK PL +
Sbjct: 51 RVSKVTATGTSKLSKITLVRKAVAKVLTVYNQRKKEEARKKYKKLSKTPLNLR 103
Score = 34.3 bits (75), Expect = 4.3
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
R K TRA RK LT + +KT KE ++ P R YA+ A
Sbjct: 103 RPKLTRAKRKGLTTKQLTMKTIKERKRAENLPKRKYALLA 142
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/86 (29%), Positives = 44/86 (51%)
Frame = +2
Query: 179 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQEDP 358
+LRV + TG +KLS+I VVRK IAR+ + Q+ +LR + K+ PL + +
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTR 92
Query: 359 CYAQGSY*TRSKDQDEERDQKEISLP 436
+ ++K + +K ++ P
Sbjct: 93 AKRRALTPQQAKKMTVKASKKALNFP 118
Score = 35.1 bits (77), Expect = 2.5
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3
Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
R K TRA R+ALT +AK T K +K FP R +A+ A
Sbjct: 87 RKKLTRAKRRALTPQQAKKMTVKASKKALNFPKRKFAIIA 126
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 34/51 (66%)
Frame = +2
Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 328
+ LRV + TGG ++L +IR +RK+IAR+ V +Q + NL+ Y ++K +
Sbjct: 30 SQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQNERSNLKMFYADRKLR 80
Score = 36.7 bits (81), Expect = 0.81
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 458
R K T R AL ++E KT +++R+ FP RVYAVK
Sbjct: 88 RTKLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYAVK 126
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 40.3 bits (90), Expect = 0.066
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
R KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 61 RPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 37.1 bits (82), Expect = 0.62
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 182 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFK 343
L + K+T V+SK SKI V K I+R+ V +Q K NLR KYKPL K
Sbjct: 17 LGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLR------KYKPLQSK 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,679,858
Number of Sequences: 1657284
Number of extensions: 6606399
Number of successful extensions: 16625
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16591
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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