Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_L05
         (905 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12465-1|AAA51648.1|  123|Homo sapiens ribosomal protein L35 pro...    79   3e-14
CR456877-1|CAG33158.1|  123|Homo sapiens RPL35 protein.                79   3e-14
BC094828-1|AAH94828.1|  123|Homo sapiens ribosomal protein L35 p...    79   3e-14
BC071915-1|AAH71915.1|  123|Homo sapiens ribosomal protein L35 p...    79   3e-14
BC010919-1|AAH10919.1|  123|Homo sapiens RPL35 protein protein.        79   3e-14
BC000348-1|AAH00348.1|  123|Homo sapiens ribosomal protein L35 p...    79   3e-14
AL354928-8|CAI39639.1|  123|Homo sapiens ribosomal protein L35 p...    79   3e-14
AL354928-7|CAI39638.1|   95|Homo sapiens ribosomal protein L35 p...    64   5e-10
AB046409-1|BAB21255.1|   33|Homo sapiens ribosomal protein L35 p...    53   2e-06

>U12465-1|AAA51648.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 78.6 bits (185), Expect = 3e-14
 Identities = 39/59 (66%), Positives = 45/59 (76%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQE 352
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q  K NLR  YK KKYKPL  + ++
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKK 87



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +3

Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
           R KKTRAMR+ L KHE  +KT+K+ RK+ L+P R YAVKA
Sbjct: 84  RPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123


>CR456877-1|CAG33158.1|  123|Homo sapiens RPL35 protein.
          Length = 123

 Score = 78.6 bits (185), Expect = 3e-14
 Identities = 39/59 (66%), Positives = 45/59 (76%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQE 352
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q  K NLR  YK KKYKPL  + ++
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKK 87



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +3

Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
           R KKTRAMR+ L KHE  +KT+K+ RK+ L+P R YAVKA
Sbjct: 84  RPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123


>BC094828-1|AAH94828.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 78.6 bits (185), Expect = 3e-14
 Identities = 39/59 (66%), Positives = 45/59 (76%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQE 352
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q  K NLR  YK KKYKPL  + ++
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKK 87



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +3

Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
           R KKTRAMR+ L KHE  +KT+K+ RK+ L+P R YAVKA
Sbjct: 84  RPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123


>BC071915-1|AAH71915.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 78.6 bits (185), Expect = 3e-14
 Identities = 39/59 (66%), Positives = 45/59 (76%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQE 352
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q  K NLR  YK KKYKPL  + ++
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKK 87



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +3

Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
           R KKTRAMR+ L KHE  +KT+K+ RK+ L+P R YAVKA
Sbjct: 84  RPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123


>BC010919-1|AAH10919.1|  123|Homo sapiens RPL35 protein protein.
          Length = 123

 Score = 78.6 bits (185), Expect = 3e-14
 Identities = 39/59 (66%), Positives = 45/59 (76%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQE 352
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q  K NLR  YK KKYKPL  + ++
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKK 87



 Score = 53.6 bits (123), Expect = 9e-07
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +3

Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
           R KKTRAMR+ L KHE  +KT+K+ RK+ L+P R YAV+A
Sbjct: 84  RPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVRA 123


>BC000348-1|AAH00348.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 78.6 bits (185), Expect = 3e-14
 Identities = 39/59 (66%), Positives = 45/59 (76%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQE 352
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q  K NLR  YK KKYKPL  + ++
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKK 87



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +3

Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
           R KKTRAMR+ L KHE  +KT+K+ RK+ L+P R YAVKA
Sbjct: 84  RPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123


>AL354928-8|CAI39639.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 78.6 bits (185), Expect = 3e-14
 Identities = 39/59 (66%), Positives = 45/59 (76%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQE 352
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q  K NLR  YK KKYKPL  + ++
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKK 87



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +3

Query: 342 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
           R KKTRAMR+ L KHE  +KT+K+ RK+ L+P R YAVKA
Sbjct: 84  RPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123


>AL354928-7|CAI39638.1|   95|Homo sapiens ribosomal protein L35
           protein.
          Length = 95

 Score = 64.5 bits (150), Expect = 5e-10
 Identities = 33/46 (71%), Positives = 36/46 (78%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYK 313
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q  K NLR  YK
Sbjct: 28  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYK 73


>AB046409-1|BAB21255.1|   33|Homo sapiens ribosomal protein L35
           protein.
          Length = 33

 Score = 52.8 bits (121), Expect = 2e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +2

Query: 182 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 280
           LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q
Sbjct: 1   LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,231,403
Number of Sequences: 237096
Number of extensions: 1178795
Number of successful extensions: 2207
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2198
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)