Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_K21
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   4.5  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      29   4.5  
L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    29   6.0  
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    29   6.0  

>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 426 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 521
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 426 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 521
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 426 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 521
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +2

Query: 125 AAGVLADDFSQITAVVTSQCTKNNAEDKVP 214
           AAG+    +SQI A V  QCTK  A  K P
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP 35


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +2

Query: 125 AAGVLADDFSQITAVVTSQCTKNNAEDKVP 214
           AAG+    +SQI A V  QCTK  A  K P
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP 35


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,068,857
Number of Sequences: 27780
Number of extensions: 391077
Number of successful extensions: 1086
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)