Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_K19
(944 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.006
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.006
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.006
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.032
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 36 0.042
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 34 0.13
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 34 0.17
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 33 0.22
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 33 0.39
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 32 0.69
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 32 0.69
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 32 0.69
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 32 0.69
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 32 0.69
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.69
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.69
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.69
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.91
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 31 0.91
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.91
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 0.91
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 0.91
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 31 0.91
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 0.91
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 0.91
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.2
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 1.2
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.6
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 31 1.6
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 30 2.1
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.8
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 3.7
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 4.8
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 6.4
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 6.4
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 29 6.4
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 6.4
U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.4
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 6.4
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 28 8.5
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 8.5
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 28 8.5
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 8.5
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 28 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Frame = -3
Query: 930 PXXGXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPG 751
P G PP+ G PG P G P PP GG P P G P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 750 RGPQ--KXXTPPSPRXGGXXXLXP 685
P K PP P G + P
Sbjct: 775 PPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 32.7 bits (71), Expect = 0.39
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXP--XXPXXXXXPGXXGXXGXXXPGRGP 742
PP+ G G PG P G P PP GG P P PG P P
Sbjct: 707 PPITG--GPPPPPGLPP-ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Query: 741 QK---XXTPPSPRXGGXXXLXPXKXPP 670
PP P GG P PP
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Frame = -3
Query: 930 PXXGXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPG 751
P G PP+ G PG P G P PP GG P P G P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 750 RGPQ--KXXTPPSPRXGGXXXLXP 685
P K PP P G + P
Sbjct: 775 PPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 32.7 bits (71), Expect = 0.39
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXP--XXPXXXXXPGXXGXXGXXXPGRGP 742
PP+ G G PG P G P PP GG P P PG P P
Sbjct: 707 PPITG--GPPPPPGLPP-ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Query: 741 QK---XXTPPSPRXGGXXXLXPXKXPP 670
PP P GG P PP
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Frame = -3
Query: 930 PXXGXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPG 751
P G PP+ G PG P G P PP GG P P G P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Query: 750 RGPQ--KXXTPPSPRXGGXXXLXP 685
P K PP P G + P
Sbjct: 358 PPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 32.7 bits (71), Expect = 0.39
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXP--XXPXXXXXPGXXGXXGXXXPGRGP 742
PP+ G G PG P G P PP GG P P PG P P
Sbjct: 290 PPITG--GPPPPPGLPP-ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Query: 741 QK---XXTPPSPRXGGXXXLXPXKXPP 670
PP P GG P PP
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 36.3 bits (80), Expect = 0.032
Identities = 26/82 (31%), Positives = 28/82 (34%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGPQK 736
PP GP G P P G P+ P GG P P PG G P +G
Sbjct: 381 PPQSGPPGAFAPP---PSAFGAPQGPGGPGGYGPPPPGGPGAPGSYG------PPQGGPG 431
Query: 735 XXTPPSPRXGGXXXLXPXKXPP 670
PP P G P PP
Sbjct: 432 GFGPPPPGGPGAYGPPPTGFPP 453
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = +2
Query: 704 PPXRGXGGVXXFWGPLPGXXXPXXPXXPGXXXXXGXXGXXPP-SXGGXRGXPXXXGXXPG 880
PP G G F P P P PG G P S G +G P G P
Sbjct: 381 PPQSGPPGA--FAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
Query: 881 KTLXPTGPXRGGXPXXG 931
GP G P G
Sbjct: 439 GGPGAYGPPPTGFPPVG 455
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 35.9 bits (79), Expect = 0.042
Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = -3
Query: 930 PXXGXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXP-GXXGXXGXXXP 754
P PP GP G K PG P G P +G P P P G G G P
Sbjct: 183 PAPTGPP--GPPGLKGMPGI-PGNQGEDAGPGRQGMPGPTGPPGPRGPPGETGDEGEGGP 239
Query: 753 GRGPQKXXTPPSPR 712
P + +PP PR
Sbjct: 240 DGIPMEKKSPPGPR 253
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Frame = -3
Query: 936 NXPXXGXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXX 757
N P P GP G P P P G P P PG G G
Sbjct: 1035 NWPSPNGPSPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSD 1094
Query: 756 PGR-GPQKXXTPPSPRXGG 703
P + GP P P G
Sbjct: 1095 PNKPGPNGPNEPSDPNKPG 1113
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGR-GPQ 739
P GP G P P P G P P PG G G P + GP
Sbjct: 1294 PGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPN 1353
Query: 738 KXXTPPSPRXGG 703
P P G
Sbjct: 1354 GPNEPSDPNKPG 1365
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGR---- 748
P GP G P P P G P P PG G G P +
Sbjct: 1322 PGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGSSDPNKPGPN 1381
Query: 747 GPQKXXTPPSPRXGG 703
GP P S GG
Sbjct: 1382 GPSNPSVPESSTGGG 1396
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGR-GPQ 739
P GP G P P P G P P PG G G P + GP
Sbjct: 1238 PGPNGPNGPSDPNKPGPNGPNEPSDPNRPGPNGPNGPLDPNKPGPNGPNGPSDPNKPGPN 1297
Query: 738 KXXTPPSPRXGG 703
P P G
Sbjct: 1298 GPNGPSDPNKPG 1309
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGR-GPQ 739
P GP G P P P G P P PG G G P + GP
Sbjct: 1280 PGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPN 1339
Query: 738 KXXTPPSPRXGG 703
P P G
Sbjct: 1340 GPNGPSDPNKPG 1351
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/80 (27%), Positives = 25/80 (31%), Gaps = 2/80 (2%)
Frame = -3
Query: 936 NXPXXGXPPLXGPVGXKVXP-GXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXX 760
N P P GP P G +P + P P G P P G G
Sbjct: 1010 NGPSPNGPSPNGPSPNGPSPNGPTPNWPS-PNGPSPNGPNGPSDPNKPGPNGPNGPSDPN 1068
Query: 759 XPG-RGPQKXXTPPSPRXGG 703
PG GP + P P G
Sbjct: 1069 KPGPNGPNEPSDPNKPGPNG 1088
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/75 (26%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGR---- 748
P GP G P P P G P P PG G G P +
Sbjct: 1112 PGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPN 1171
Query: 747 GPQKXXTPPSPRXGG 703
GP + P P G
Sbjct: 1172 GPNESSDPNKPGPNG 1186
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 33.9 bits (74), Expect = 0.17
Identities = 25/77 (32%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXG----XPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXP 754
G P GP G PG G PR P + G P P PG G G
Sbjct: 143 GPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAG-SPGQPGHPGSPGNPGRGGQRSR 201
Query: 753 G-RGPQKXXTPPSPRXG 706
G GP PP P G
Sbjct: 202 GLPGPSGRPGPPGPAGG 218
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 33.5 bits (73), Expect = 0.22
Identities = 26/86 (30%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGX--SPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGR 748
G P GP G PG +P G P G P P PG G G G
Sbjct: 218 GAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGY 277
Query: 747 GPQKXXTP-PSPRXGGXXXLXPXKXP 673
G P PS R G P P
Sbjct: 278 GVGPPGPPGPSGRPGAPGQPGPDGQP 303
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/72 (31%), Positives = 24/72 (33%)
Frame = -3
Query: 930 PXXGXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPG 751
P G P GP G PG +P G P P P P PG G G G
Sbjct: 211 PPPGPPGPPGPPGNDGQPG-APGQDGQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDGSG 269
Query: 750 RGPQKXXTPPSP 715
Q PP P
Sbjct: 270 GAAQPG--PPGP 279
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +2
Query: 752 PGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGKTLXPTGPXRGGXP 922
PG P P PG G G P G G P G PG P GP + G P
Sbjct: 251 PGPAGPPGP--PGPPGQDGSGGAAQPGPPGPPGPPGNDG-QPGGPGQPGGPGQDGGP 304
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = -1
Query: 758 NREGGPKX---PXPPXPPGXXGGXXXXRXXPPXP 666
N GGP P PP PPG G + PP P
Sbjct: 246 NSPGGPGPAGPPGPPGPPGQDGSGGAAQPGPPGP 279
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 31.9 bits (69), Expect = 0.69
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXG-XXXPGRG 745
G P G G PG +P G P P E P P PG G G PGR
Sbjct: 691 GFPGAKGDGGLPGLPG-TPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGR- 748
Query: 744 PQKXXTPPSPRXGGXXXLXPXKXPP 670
P + P P G PP
Sbjct: 749 PGEVGQPGFPGLPGMKGDSGLPGPP 773
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +2
Query: 704 PPXRGXGGVXXFWGPLPGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGK 883
P +G GG+ F G P P PG G G P G G P G P
Sbjct: 1373 PGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGL--PGLPGRDGLPGADG--PVG 1428
Query: 884 TLXPTGP 904
P+GP
Sbjct: 1429 PPGPSGP 1435
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 31.9 bits (69), Expect = 0.69
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXG-XXXPGRG 745
G P G G PG +P G P P E P P PG G G PGR
Sbjct: 690 GFPGAKGDGGLPGLPG-TPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGR- 747
Query: 744 PQKXXTPPSPRXGGXXXLXPXKXPP 670
P + P P G PP
Sbjct: 748 PGEVGQPGFPGLPGMKGDSGLPGPP 772
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +2
Query: 704 PPXRGXGGVXXFWGPLPGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGK 883
P +G GG+ F G P P PG G G P G G P G P
Sbjct: 1372 PGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGL--PGLPGRDGLPGADG--PVG 1427
Query: 884 TLXPTGP 904
P+GP
Sbjct: 1428 PPGPSGP 1434
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 31.9 bits (69), Expect = 0.69
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXG-XXXPGRG 745
G P G G PG +P G P P E P P PG G G PGR
Sbjct: 690 GFPGAKGDGGLPGLPG-TPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGR- 747
Query: 744 PQKXXTPPSPRXGGXXXLXPXKXPP 670
P + P P G PP
Sbjct: 748 PGEVGQPGFPGLPGMKGDSGLPGPP 772
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +2
Query: 704 PPXRGXGGVXXFWGPLPGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGK 883
P +G GG+ F G P P PG G G P G G P G P
Sbjct: 1372 PGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGL--PGLPGRDGLPGADG--PVG 1427
Query: 884 TLXPTGP 904
P+GP
Sbjct: 1428 PPGPSGP 1434
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 31.9 bits (69), Expect = 0.69
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXG-XXXPGRG 745
G P G G PG +P G P P E P P PG G G PGR
Sbjct: 691 GFPGAKGDGGLPGLPG-TPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGR- 748
Query: 744 PQKXXTPPSPRXGGXXXLXPXKXPP 670
P + P P G PP
Sbjct: 749 PGEVGQPGFPGLPGMKGDSGLPGPP 773
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +2
Query: 704 PPXRGXGGVXXFWGPLPGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGK 883
P +G GG+ F G P P PG G G P G G P G P
Sbjct: 1373 PGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGL--PGLPGRDGLPGADG--PVG 1428
Query: 884 TLXPTGP 904
P+GP
Sbjct: 1429 PPGPSGP 1435
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 31.9 bits (69), Expect = 0.69
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXG-XXXPGRG 745
G P G G PG +P G P P E P P PG G G PGR
Sbjct: 727 GFPGAKGDGGLPGLPG-TPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGR- 784
Query: 744 PQKXXTPPSPRXGGXXXLXPXKXPP 670
P + P P G PP
Sbjct: 785 PGEVGQPGFPGLPGMKGDSGLPGPP 809
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +2
Query: 704 PPXRGXGGVXXFWGPLPGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGK 883
P +G GG+ F G P P PG G G P G G P G P
Sbjct: 1409 PGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGL--PGLPGRDGLPGADG--PVG 1464
Query: 884 TLXPTGP 904
P+GP
Sbjct: 1465 PPGPSGP 1471
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.69
Identities = 25/90 (27%), Positives = 27/90 (30%), Gaps = 3/90 (3%)
Frame = -3
Query: 930 PXXGXPPLXGPVGXKVXPGXS---PXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXX 760
P G PPL G P P G P PP G P P G
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Query: 759 XPGRGPQKXXTPPSPRXGGXXXLXPXKXPP 670
P RG + P P+ GG PP
Sbjct: 301 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 752 PGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGKTLXPTGPXRGGXP 922
P P P G G PP G P P T P P GG P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.69
Identities = 25/90 (27%), Positives = 27/90 (30%), Gaps = 3/90 (3%)
Frame = -3
Query: 930 PXXGXPPLXGPVGXKVXPGXS---PXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXX 760
P G PPL G P P G P PP G P P G
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Query: 759 XPGRGPQKXXTPPSPRXGGXXXLXPXKXPP 670
P RG + P P+ GG PP
Sbjct: 322 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 752 PGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGKTLXPTGPXRGGXP 922
P P P G G PP G P P T P P GG P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.69
Identities = 25/90 (27%), Positives = 27/90 (30%), Gaps = 3/90 (3%)
Frame = -3
Query: 930 PXXGXPPLXGPVGXKVXPGXS---PXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXX 760
P G PPL G P P G P PP G P P G
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Query: 759 XPGRGPQKXXTPPSPRXGGXXXLXPXKXPP 670
P RG + P P+ GG PP
Sbjct: 307 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 752 PGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGKTLXPTGPXRGGXP 922
P P P G G PP G P P T P P GG P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGPQK 736
PP+ G P P P PP G P P P PG G
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 334
Query: 735 XXTPPSPR-XGGXXXLXPXKXP 673
PP R GG P + P
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYP 356
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXP---PXEGGXXPXXPXXXXXPGXXGXXG-XXXP 754
G P GP G PG P P+ P P G P P PG G G P
Sbjct: 174 GTPGEIGPPGPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKP 233
Query: 753 G-RGPQ 739
G +GP+
Sbjct: 234 GDQGPR 239
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGPQK 736
PP+ G P P P PP G P P P PG G
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 344
Query: 735 XXTPPSPR-XGGXXXLXPXKXP 673
PP R GG P + P
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYP 366
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/67 (35%), Positives = 24/67 (35%)
Frame = +2
Query: 704 PPXRGXGGVXXFWGPLPGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGK 883
PP G GG GP G P G G G PP GG G P G PG
Sbjct: 155 PPLMGGGGDPR--GPPGGMGGPPGHGGMGGPPGHGGQGG-PPGHGGMGGPPPGQGG-PGG 210
Query: 884 TLXPTGP 904
P GP
Sbjct: 211 PGGPGGP 217
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Frame = -3
Query: 930 PXXGXPPLXGPVGX-KVXPGXSPXFXGX--PRXPPXEGGXXPXXPXXXXXPGXXGXXGXX 760
P G P P G V G P G PR PP G P PG G G
Sbjct: 134 PPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGG-- 191
Query: 759 XPGRGPQKXXTPPSPRXGG 703
PG G P GG
Sbjct: 192 PPGHGGMGGPPPGQGGPGG 210
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/67 (35%), Positives = 24/67 (35%)
Frame = +2
Query: 704 PPXRGXGGVXXFWGPLPGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGK 883
PP G GG GP G P G G G PP GG G P G PG
Sbjct: 435 PPLMGGGGDPR--GPPGGMGGPPGHGGMGGPPGHGGQGG-PPGHGGMGGPPPGQGG-PGG 490
Query: 884 TLXPTGP 904
P GP
Sbjct: 491 PGGPGGP 497
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Frame = -3
Query: 930 PXXGXPPLXGPVGX-KVXPGXSPXFXGX--PRXPPXEGGXXPXXPXXXXXPGXXGXXGXX 760
P G P P G V G P G PR PP G P PG G G
Sbjct: 414 PPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGG-- 471
Query: 759 XPGRGPQKXXTPPSPRXGG 703
PG G P GG
Sbjct: 472 PPGHGGMGGPPPGQGGPGG 490
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXP---PXEGGXXPXXPXXXXXPGXXGXXG-XXXP 754
G P GP G PG P P+ P P G P P PG G G P
Sbjct: 155 GTPGEIGPPGPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKP 214
Query: 753 G-RGPQ 739
G +GP+
Sbjct: 215 GDQGPR 220
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.91
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 767 GXXNREGGPKXPXPPXPPGXXGGXXXXRXXPPXPLPXD 654
G GG P P PPG GG PP P+P D
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGFMPP-PPPPPPMPGD 685
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.91
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 767 GXXNREGGPKXPXPPXPPGXXGGXXXXRXXPPXPLPXD 654
G GG P P PPG GG PP P+P D
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGFMPP-PPPPPPMPGD 685
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEG----GXXPXXPXXXXXPGXXGXXGXXXP 754
G P G G PG +P G P PP E P P PG G G
Sbjct: 98 GPPGTPGSAGRPGKPG-APGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDG- 155
Query: 753 GRGPQKXXTPPSP 715
+GP PP P
Sbjct: 156 NKGPLGPPGPPGP 168
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXE-GGXXPXXPXXXXXPGXXGXXGXXXPGRG 745
G P GP G PG P P PP E G P PG G G P
Sbjct: 173 GEPGNKGPAGPP-GPGGKPG----PAGPPGENGNNGEPQPGAPGEPGQPGQPGQRGPAGE 227
Query: 744 PQKXXTP 724
P K +P
Sbjct: 228 PGKDGSP 234
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/70 (32%), Positives = 26/70 (37%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGP 742
G P GP+G PG P+ PP + G P PG G G PG G
Sbjct: 259 GPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPG-IDGAPGNPGSPGEPGPPG--QPGAGG 315
Query: 741 QKXXTPPSPR 712
PP PR
Sbjct: 316 GCDHCPP-PR 324
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEG----GXXPXXPXXXXXPGXXGXXGXXXP 754
G P G G PG +P G P PP E P P PG G G
Sbjct: 96 GPPGTPGRAGRPGKPG-APGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQG- 153
Query: 753 GRGPQKXXTPPSP 715
+GP PP P
Sbjct: 154 NKGPLGPPGPPGP 166
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/77 (35%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPP---XEGGXXPXXPXXXXXPGXXGXXG-XXXP 754
G P L G G PG +P G P PP E P P PG G G P
Sbjct: 99 GRPGLPGRNGKPGVPG-APGRPGTPGRPPIVCEEQDVPPCNPCPPGPPGPQGPTGNSGQP 157
Query: 753 GRGPQKXXTPPSPRXGG 703
GR P P SP G
Sbjct: 158 GR-PGNPGRPGSPGTPG 173
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/78 (33%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Frame = -3
Query: 930 PXXGXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPG 751
P PP G G K PG P G P P G P P PG G G PG
Sbjct: 179 PGGDAPP--GEAGPKGPPGP-PGSPGAPGEPGRPGDDAPSEPLIPGEPGPQGPPG--PPG 233
Query: 750 R-GPQ-KXXTPPSPRXGG 703
+ GP + P P G
Sbjct: 234 QAGPDGQPGAPGGPGTPG 251
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = -3
Query: 930 PXXGXPPLXGPVGXKVXPGXS-PXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXP 754
P PP GPV P S P P PP P P PG G P
Sbjct: 221 PKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
Query: 753 G 751
G
Sbjct: 281 G 281
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = -3
Query: 930 PXXGXPPLXGPVGXKVXPGXSPXFXGX-PRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXP 754
P PP GP G P P F G P PP GG P P P G
Sbjct: 70 PNGFIPPPPGPGGIPPPP---PMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVA 126
Query: 753 GRGPQKXXTPPSP 715
+ P + TP +P
Sbjct: 127 PQ-PPRPKTPVNP 138
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGP 742
G P G G + P P G P P +G P PG G G P P
Sbjct: 170 GGPGQDGQPG-QPGPKGPPGVNGQPGAPGQDGNPGQDAPSEPLVPGEPGAPGEAGPQGPP 228
Query: 741 QKXXTP 724
+ TP
Sbjct: 229 GQPGTP 234
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGP 742
G P G G PG P P PP P PG G G GP
Sbjct: 113 GRPGKPGVAGLPGNPGRPPQAPCDPITPPPCKPCPQGPPGVQGPPGPAGDAGLDGQPGGP 172
Query: 741 QKXXTPPSPRXGG 703
+ P P G
Sbjct: 173 GQDGQPGQPGPKG 185
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGP 742
G P GP G PG P G P P G P PG G G P
Sbjct: 174 GAPGPQGPAGDNGQPGR-PGNDGRPGAPGAPGTRSVGRPGTAGSPGPQGPPGQNGNDGQP 232
Query: 741 QKXXTPPSPRXGG 703
P P G
Sbjct: 233 GNDGAPGQPGQPG 245
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.1 bits (62), Expect = 4.8
Identities = 27/95 (28%), Positives = 29/95 (30%), Gaps = 11/95 (11%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXG----XPRXPPXEGG--XXPXXPXXXXXPGXXGXXGXX 760
G P GP G PG G PR P + G P P PG G
Sbjct: 143 GPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRG 202
Query: 759 XPGR----GPQ-KXXTPPSPRXGGXXXLXPXKXPP 670
PG GPQ P P G + PP
Sbjct: 203 TPGASGRPGPQGPAGAPGQPGRSGGAGTPGPQGPP 237
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGP 742
G P G G G P P G P P PG G G G G
Sbjct: 122 GAPGAWGMPGNPGKGGSGPCHPVVPTPCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGA 181
Query: 741 QKXXTPPSPR 712
PP P+
Sbjct: 182 APRPGPPGPK 191
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXP 754
G P G G PG P P PP P P PG G G P
Sbjct: 116 GTPGRPGAPGAPGHPGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGP 171
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -1
Query: 728 PPXPPGXXGGXXXXRXXPPXPLPXDXXXXKGEPLV 624
PP PP GG + P P+P D P++
Sbjct: 252 PPPPPQTDGGASSSKRQDPLPMPPDSKRIATRPVI 286
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +2
Query: 749 LPGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGKTLXPTGPXRGG 916
LPG P PG G G PS R P PG P GP GG
Sbjct: 138 LPGGCIQCPPGRPGPRGPPGEVGPAGPSGDNGRKGP------PGPPGGPGGPGEGG 187
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +2
Query: 749 LPGXXXPXXPXXPGXXXXXGXXGXXPPSXGGXRGXPXXXGXXPGKTLXPTGPXRGG 916
LPG P PG G G PS R P PG P GP GG
Sbjct: 138 LPGGCIQCPPGRPGPRGPPGEVGPAGPSGDNGRKGP------PGPPGGPGGPGEGG 187
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXG-XXXPGRG 745
G P G G PG P P PP P PG G G PGR
Sbjct: 119 GKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR- 177
Query: 744 PQKXXTP--PSPR 712
P TP P PR
Sbjct: 178 PGTDATPGLPGPR 190
>U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical
protein F08B4.7 protein.
Length = 142
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -3
Query: 930 PXXGXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGG 823
P G PP + + PG F G P PP GG
Sbjct: 83 PMMGGPPGMPMMAPRPFPGPGVGFPGAPGMPPFPGG 118
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -1
Query: 758 NREGGPKXPXPPXPPGXXGGXXXXRXXPPXPLPXDXXXXKGEPL 627
+R P P PP PP PP P P G PL
Sbjct: 1331 SRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPL 1374
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXG-XXXPGRG 745
G P G G PG P P PP P PG G G PGR
Sbjct: 119 GKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR- 177
Query: 744 PQKXXTP--PSPR 712
P TP P PR
Sbjct: 178 PGTDATPGLPGPR 190
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXG-XXXPGRG 745
G P G G PG P P PP P PG G G PGR
Sbjct: 117 GKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR- 175
Query: 744 PQKXXTPPSPRXGG 703
P P SP G
Sbjct: 176 PGTDAAPGSPGPRG 189
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/73 (27%), Positives = 23/73 (31%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGP 742
G P G G K G +P G P P G PG G G P GP
Sbjct: 179 GHPGAPGQPGSKGNNG-APGAAGGPGQPGRPGKDGQRGKGSAGAPGAPGKAGPAGPAGGP 237
Query: 741 QKXXTPPSPRXGG 703
+ +P G
Sbjct: 238 GNNGSAGTPGPAG 250
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXG-XXXPGRG 745
G P G G PG P P PP P PG G G PGR
Sbjct: 112 GKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR- 170
Query: 744 PQKXXTPPSPRXGG 703
P P SP G
Sbjct: 171 PGTDAAPGSPGPRG 184
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGP 742
G G G K PG P G P P G P PG G G P P
Sbjct: 175 GQDAAPGEPGPKGPPGP-PGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSP 233
Query: 741 QKXXTPPSPRXGG 703
+ SP G
Sbjct: 234 GQPGADGSPGQPG 246
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/71 (28%), Positives = 22/71 (30%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGPQK 736
P GP G PG +P G P P P P PG G G P
Sbjct: 180 PGEPGPKGPPGPPG-APGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGA 238
Query: 735 XXTPPSPRXGG 703
+P P G
Sbjct: 239 DGSPGQPGPKG 249
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXG-XXXPGRG 745
G P G G PG P P PP P PG G G PGR
Sbjct: 112 GKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR- 170
Query: 744 PQKXXTPPSPRXGG 703
P P SP G
Sbjct: 171 PGTDAAPGSPGPRG 184
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = -3
Query: 921 GXPPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGP 742
G G G K PG P G P P G P PG G G P P
Sbjct: 175 GQDAAPGEPGPKGPPGP-PGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSP 233
Query: 741 QKXXTPPSPRXGG 703
+ SP G
Sbjct: 234 GQPGADGSPGQPG 246
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/71 (28%), Positives = 22/71 (30%)
Frame = -3
Query: 915 PPLXGPVGXKVXPGXSPXFXGXPRXPPXEGGXXPXXPXXXXXPGXXGXXGXXXPGRGPQK 736
P GP G PG +P G P P P P PG G G P
Sbjct: 180 PGEPGPKGPPGPPG-APGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGA 238
Query: 735 XXTPPSPRXGG 703
+P P G
Sbjct: 239 DGSPGQPGPKG 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,254,325
Number of Sequences: 27780
Number of extensions: 209227
Number of successful extensions: 1297
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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