Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_K18
         (1195 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023794-1|AAZ41803.1|  409|Drosophila melanogaster GH05001p pro...    68   3e-11
AE014298-2746|AAF48865.1|  832|Drosophila melanogaster CG6606-PA...    68   3e-11

>BT023794-1|AAZ41803.1|  409|Drosophila melanogaster GH05001p
           protein.
          Length = 409

 Score = 67.7 bits (158), Expect = 3e-11
 Identities = 30/38 (78%), Positives = 31/38 (81%)
 Frame = +2

Query: 170 MWDPTHVQVTVQKARGLLIKGKNGTNNCXVTIALG*RK 283
           MW PTH  VTVQ+ARGLL KGKNGTNNC VTIALG  K
Sbjct: 1   MWSPTHCSVTVQRARGLLTKGKNGTNNCFVTIALGKEK 38



 Score = 39.1 bits (87), Expect = 0.012
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +3

Query: 225 SKGKTVQITVXLPLPSGKEKFQTSVKHNATXNVEWLEEC 341
           +KGK       + +  GKEK+QTSVK  A  +V W EEC
Sbjct: 19  TKGKNGTNNCFVTIALGKEKYQTSVKDKAETSVNWNEEC 57


>AE014298-2746|AAF48865.1|  832|Drosophila melanogaster CG6606-PA
           protein.
          Length = 832

 Score = 67.7 bits (158), Expect = 3e-11
 Identities = 30/38 (78%), Positives = 31/38 (81%)
 Frame = +2

Query: 170 MWDPTHVQVTVQKARGLLIKGKNGTNNCXVTIALG*RK 283
           MW PTH  VTVQ+ARGLL KGKNGTNNC VTIALG  K
Sbjct: 1   MWSPTHCSVTVQRARGLLTKGKNGTNNCFVTIALGKEK 38



 Score = 39.1 bits (87), Expect = 0.012
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +3

Query: 225 SKGKTVQITVXLPLPSGKEKFQTSVKHNATXNVEWLEEC 341
           +KGK       + +  GKEK+QTSVK  A  +V W EEC
Sbjct: 19  TKGKNGTNNCFVTIALGKEKYQTSVKDKAETSVNWNEEC 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,471,816
Number of Sequences: 53049
Number of extensions: 346530
Number of successful extensions: 459
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6315662550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)