Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_K17
         (1179 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504...    32   1.0  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           30   3.1  
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817           30   4.1  

>07_01_0674 +
           5047503-5047646,5047808-5047901,5048743-5048828,
           5049380-5049429,5049517-5049586,5049668-5049749,
           5049867-5050267,5050414-5050941,5051823-5052044
          Length = 558

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 19/56 (33%), Positives = 21/56 (37%)
 Frame = +1

Query: 301 AXXXPPSXPXXPXXGXPXXSSSALGSXXPTXPXXRPPAPXXPXRXLVXGAXPXXPP 468
           A   PP  P  P    P   + A G   P  P   PP P  P R +V G     PP
Sbjct: 223 AASLPPLPPPPPPPPKPANIAGAPGLPLPPPP---PPPPGPPPREIVPGQTLLPPP 275


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 19/56 (33%), Positives = 21/56 (37%)
 Frame = +1

Query: 301 AXXXPPSXPXXPXXGXPXXSSSALGSXXPTXPXXRPPAPXXPXRXLVXGAXPXXPP 468
           A   PP+ P  P    P  S SA G+     P   PPA     R    G  P  PP
Sbjct: 320 APPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPP-PPAAPAAPRPPGPGPGPPPPP 374


>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
          Length = 883

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/38 (34%), Positives = 15/38 (39%)
 Frame = +1

Query: 313 PPSXPXXPXXGXPXXSSSALGSXXPTXPXXRPPAPXXP 426
           PP  P  P    P  +   L +  PT P   PPA   P
Sbjct: 440 PPLVPTPPAHAPPVATPPTLATPVPTPPVTAPPADVPP 477


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,587,733
Number of Sequences: 37544
Number of extensions: 165913
Number of successful extensions: 348
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3608253564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)