Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_K09
(880 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 83 4e-17
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 50 4e-07
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 50 6e-07
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 44 3e-05
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 38 0.002
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 38 0.002
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 33 0.071
SPAC1952.07 |rad1||checkpoint clamp complex protein Rad1|Schizos... 28 1.5
SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces... 27 2.7
SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5 |Schizosacch... 26 6.1
SPBC17D1.02 |||diphthamide biosynthesis protein |Schizosaccharom... 26 6.1
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 26 8.1
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 26 8.1
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 83.4 bits (197), Expect = 4e-17
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Frame = +3
Query: 159 LQKLYVLRCRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFY 338
L + Y C HC P++ EL L + I ++D H+ + + ITG+PTL +
Sbjct: 43 LIEFYATWCGHCKSLAPVYEELGALFEDHNDVL-IGKIDADTHSDVADKYHITGFPTLIW 101
Query: 339 FHKNTFTPVEYKGTRDLPSLTLFLSEAFSVKTEGKQSKQPNEVKTYSGMSYLNDLNIEKF 518
F + PV+Y RD+ SLT F+SE +K ++ S + L+ LN +K
Sbjct: 102 FPPDGSEPVQYSNARDVDSLTQFVSEKTGIK--------KRKIVLPSNVVELDSLNFDKV 153
Query: 519 V--SKGQHFIMFFVPWCRASQRMAPIWADLAVHYAHNNYIKIGKVN 650
V K + F+ WC +R+AP + L + + ++I K+N
Sbjct: 154 VMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKIN 199
Score = 48.8 bits (111), Expect = 1e-06
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +3
Query: 492 LNDLNIEKFVSKGQHFIMFFVPWCRASQRMAPIWADLAVHYAHNNYIKIGKVNCMDNEIT 671
LN+L SK I F+ WC + +AP++ +L + +N + IGK++ +
Sbjct: 28 LNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDV 87
Query: 672 CKNFEVKQYPYLLWIV--NGKIMGASNGENLDDLKAFVEK 785
+ + +P L+W + + SN ++D L FV +
Sbjct: 88 ADKYHITGFPTLIWFPPDGSEPVQYSNARDVDSLTQFVSE 127
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 50.0 bits (114), Expect = 4e-07
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Frame = +3
Query: 492 LNDLNIEKFVSKGQHFIMFFVPWCRASQRMAPIWADL---AVHYAHNNYIKIGKVNCMDN 662
L D ++E VSKG FI +++P C A +R+ P+W ++ A + G+V+C
Sbjct: 31 LTDNDLESEVSKGTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKE 90
Query: 663 EITCKNFEVKQYPYLLWIVNGKIM-----GASNGENLDDLKAFVEKMLLSENHDPE 815
+C N ++ P L NG+I+ GAS E L FVE L+ + DP+
Sbjct: 91 LSSCAN--IRAVPTLYLYQNGEIVEEVPFGASTSE--ASLLDFVETH-LNPDTDPD 141
Score = 42.7 bits (96), Expect = 7e-05
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = +3
Query: 165 KLYVLRCRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFH 344
+ Y C C + W +A N K +A ++C V + C + I +PT +F
Sbjct: 304 QFYSSECDDCDDVSTAWYAMA---NRMRGKLNVAHINCAVSKRACKQYSIQYFPTFLFFK 360
Query: 345 KNTFTPVEYKGTRDLPSLTLFLSEA 419
+ F VEY G + L F EA
Sbjct: 361 EEAF--VEYVGLPNEGDLVSFAEEA 383
Score = 31.9 bits (69), Expect = 0.12
Identities = 25/132 (18%), Positives = 49/132 (37%)
Frame = +3
Query: 390 PSLTLFLSEAFSVKTEGKQSKQPNEVKTYSGMSYLNDLNIEKFVSKGQHFIMFFVPWCRA 569
PS E + + + K N T ++ D++ K FI F+ C
Sbjct: 254 PSFPKEKEEKENTEETEESKKSINPTGTSKALALDADIDAA-LTDKEGWFIQFYSSECDD 312
Query: 570 SQRMAPIWADLAVHYAHNNYIKIGKVNCMDNEITCKNFEVKQYPYLLWIVNGKIMGASNG 749
++ W +A + + +NC ++ CK + ++ +P L+ +
Sbjct: 313 CDDVSTAWYAMANRM--RGKLNVAHINCAVSKRACKQYSIQYFPTFLFFKEEAFVEYVGL 370
Query: 750 ENLDDLKAFVEK 785
N DL +F E+
Sbjct: 371 PNEGDLVSFAEE 382
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 49.6 bits (113), Expect = 6e-07
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 159 LQKLYVLRCRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFY 338
L + Y C HC P + +LAE + DS +A++D T + I+G+PT+ +
Sbjct: 377 LVEFYAPWCGHCKNLAPTYEKLAE-EYSDDSNVVVAKIDATEND---ISVSISGFPTIMF 432
Query: 339 FHKN-TFTPVEYKGTRDLPSLTLFLSEAFSVKTEGKQSK 452
F N PV Y+G R L L+ F+ + S + K+ +
Sbjct: 433 FKANDKVNPVRYEGDRTLEDLSAFIDKHASFEPIKKEKE 471
Score = 48.4 bits (110), Expect = 1e-06
Identities = 29/82 (35%), Positives = 39/82 (47%)
Frame = +3
Query: 165 KLYVLRCRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFH 344
K Y C HC P + A+ + KD ++ +VDCT LC E I GYPTL F
Sbjct: 45 KFYAPWCGHCKALAPEYESAADELE-KDG-ISLVEVDCTEEGDLCSEYSIRGYPTLNVF- 101
Query: 345 KNTFTPVEYKGTRDLPSLTLFL 410
KN +Y G R +L ++
Sbjct: 102 KNGKQISQYSGPRKHDALVKYM 123
Score = 46.0 bits (104), Expect = 7e-06
Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +3
Query: 540 IMFFVPWCRASQRMAPIWADLAVHYAHNNYIKIGKVNCMDNEITCKNFEVKQYPYLLWI- 716
+ F+ PWC + +AP + LA Y+ ++ + + K++ +N+I + + +P +++
Sbjct: 378 VEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATENDI---SVSISGFPTIMFFK 434
Query: 717 VNGKI--MGASNGENLDDLKAFVEK 785
N K+ + L+DL AF++K
Sbjct: 435 ANDKVNPVRYEGDRTLEDLSAFIDK 459
Score = 42.7 bits (96), Expect = 7e-05
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 540 IMFFVPWCRASQRMAPIWADLAVHYAHNNYIKIGKVNCMDNEITCKNFEVKQYPYLLWIV 719
+ F+ PWC + +AP + + A + I + +V+C + C + ++ YP L
Sbjct: 44 VKFYAPWCGHCKALAPEY-ESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFK 102
Query: 720 NGKIMGASNGENLDD-LKAFVEKMLL 794
NGK + +G D L ++ K LL
Sbjct: 103 NGKQISQYSGPRKHDALVKYMRKQLL 128
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 44.0 bits (99), Expect = 3e-05
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 492 LNDLNIEKFV-SKGQHFIMFFVPWCRASQRMAPIWADLAVHYAHNNYIKIGKVNC--MDN 662
LN N KFV +KG ++F+ PWC +++ P + LA + ++ + + V+C N
Sbjct: 36 LNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNL--HSLLPVTAVDCDADQN 93
Query: 663 EITCKNFEVKQYP 701
C ++V+ +P
Sbjct: 94 RAVCSQYQVQGFP 106
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +3
Query: 549 FVPWCRASQRMAPIWADLAVHYAHNNYIKIGKVNCMDNEITCKNFEVKQYPYLLWIVNGK 728
+ WC + ++P+++ LA YA ++ KVN + VK P ++ NGK
Sbjct: 27 YADWCGPCKAISPLFSQLASKYASPKFV-FAKVNVDEQRQIASGLGVKAMPTFVFFENGK 85
Query: 729 IMGASNGENLDDLK 770
+ G N LK
Sbjct: 86 QIDMLTGANPQALK 99
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/81 (25%), Positives = 36/81 (44%)
Frame = +3
Query: 183 CRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFHKNTFTP 362
C C + +WS + NT D + +AQV+C ++C+ I +PT F F
Sbjct: 209 CEDCFHWEAVWSSITR--NT-DERLKMAQVNCDEEKEMCNHFHIKKFPTFRVF--QGFDS 263
Query: 363 VEYKGTRDLPSLTLFLSEAFS 425
++Y G L + ++ S
Sbjct: 264 IQYNGPLKYQQLLSYSNQVAS 284
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 32.7 bits (71), Expect = 0.071
Identities = 18/82 (21%), Positives = 37/82 (45%)
Frame = +3
Query: 546 FFVPWCRASQRMAPIWADLAVHYAHNNYIKIGKVNCMDNEITCKNFEVKQYPYLLWIVNG 725
F+ PW ++M ++ A + ++KI D ++F+V P + I
Sbjct: 27 FYAPWAAPCKQMNQVFDQFAKDTKNAVFLKIEAEKFSD---IAESFDVNAVPLFVLIHGA 83
Query: 726 KIMGASNGENLDDLKAFVEKML 791
K++ +G N LKA +++ +
Sbjct: 84 KVLARISGANPQKLKAAIDEYI 105
>SPAC1952.07 |rad1||checkpoint clamp complex protein
Rad1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 323
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 521 VKRTAFHHVFCTLVSCLSEDGTDLGRLSSTLRSQQLHK-NW 640
V+ A + C L++ ED D+ RL+STL ++ + K NW
Sbjct: 127 VEEMAGYATACELLTMECEDDVDINRLASTLCTKIIMKSNW 167
>SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +3
Query: 216 SELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFH 344
+ + +L +K VDC + C E I +P+L Y++
Sbjct: 141 TSIVQLSKKYRNKIKFKSVDCASSLEKCEEIGINSFPSLVYYN 183
>SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = +3
Query: 186 RHCTEFYPIWSELAELVNTKDS 251
R +EFY ++++++++VNT D+
Sbjct: 566 RRASEFYILFNQVSDIVNTSDT 587
>SPBC17D1.02 |||diphthamide biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 503
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 432 TEGKQSKQPNEVKTYSGMSYLNDLNIEKFVS 524
+EGKQSK+P+EV T L KFV+
Sbjct: 380 SEGKQSKEPSEVLTEESAEPHFSLITGKFVN 410
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 25.8 bits (54), Expect = 8.1
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -2
Query: 669 LSHYPYN*LFQFLCSCCERNXXXXXXXXXXXSERHD---TKVQKT**N-AVLLTQTSQYS 502
LS+YPYN + S C N S R D + QK N AVL Q+SQ S
Sbjct: 496 LSNYPYNDYRVYRMSHCSSNSNKVLASEISESLRRDLLWERRQKAAMNSAVLRRQSSQSS 555
Query: 501 GHSD 490
G +D
Sbjct: 556 GAND 559
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 666 ITCKNFEVKQYPYLLWIVNGKIMGASNGENLDDLKAFVEKMLLSENHDP 812
I KN E+K + + + G N NL++ AFVE +++ P
Sbjct: 213 IPLKNGEIKSTMLMPSDSDNSVPGIQNSNNLENTGAFVENANSPQSNTP 261
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,509,163
Number of Sequences: 5004
Number of extensions: 72041
Number of successful extensions: 216
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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