Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_K04
(881 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 60 2e-09
12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773... 35 0.075
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 33 0.23
11_01_0668 + 5441363-5441728,5442136-5442291,5442359-5442619 31 1.2
03_03_0149 + 14843880-14844145,14846501-14846561,14846608-148467... 31 1.2
03_04_0140 + 17638335-17638583,17638843-17639061,17639206-176394... 30 2.1
05_06_0104 - 25603568-25603867,25603965-25604162,25604247-256045... 29 3.7
04_04_0251 + 23930789-23930960,23931065-23931128,23931641-239317... 29 3.7
04_01_0063 - 630345-633743 29 4.9
02_02_0074 + 6567362-6567550,6567685-6567753,6567869-6567970,656... 29 4.9
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 29 4.9
01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403... 29 4.9
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709... 29 6.5
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 29 6.5
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 29 6.5
11_03_0031 - 9094643-9095824,9095945-9096034,9096141-9096216,909... 28 8.6
04_03_0784 - 19610370-19611548,19611830-19611919,19612001-196120... 28 8.6
02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826... 28 8.6
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 28 8.6
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 60.5 bits (140), Expect = 2e-09
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +2
Query: 332 RTLPNVLVTGTPGVGKSTLCRNLADRTKFGWRDVSNIAQEHNCLDEYDPEYQCPFLNED 508
RT PNVLVTGTPG GK+T C LAD ++ ++ +E + D +D E +C +NED
Sbjct: 10 RTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINED 68
>12_01_0833 -
7730761-7731030,7731171-7731425,7731565-7731736,
7731873-7732106,7732362-7732495,7734116-7734199,
7735086-7735376,7735566-7735898,7736351-7736424,
7736558-7736653,7736876-7737029,7737118-7737221,
7737325-7737485,7737774-7738087,7738950-7739231,
7739909-7740210,7740513-7740713,7740924-7741014,
7741424-7741500,7741595-7741754,7742026-7742110,
7742194-7742288
Length = 1322
Score = 35.1 bits (77), Expect = 0.075
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 287 FSSSFTKYQIKMN-SGRTLPN--VLVTGTPGVGKSTLCRNLADRTKFGWRDVSNIAQEHN 457
FS +K QI N SG P+ L+ G PG GK+TL + LA R ++ I
Sbjct: 11 FSHHQSKVQILENVSGIIKPSRITLLLGPPGCGKTTLLKALAGRLNKSLKETGEIEYNGV 70
Query: 458 CLDEYDPEYQCPFLNE 505
LDE+ P ++++
Sbjct: 71 KLDEFVPAKTSAYVSQ 86
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 33.5 bits (73), Expect = 0.23
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 350 LVTGTPGVGKSTLCRNLADRTKFGWRDVSNIAQEHNCLDEYDPEYQCPFLNE 505
L+ G PG GK+TL LA G + I + +DE++P ++++
Sbjct: 78 LLLGPPGAGKTTLLLALAGNVPSGLKVSGQITYNGHTMDEFEPRRSAAYVSQ 129
>11_01_0668 + 5441363-5441728,5442136-5442291,5442359-5442619
Length = 260
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/71 (33%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +2
Query: 296 SFTKYQIKMNSGRT--LPNVLVTGTPGVGKSTLCRNLADRTKFGWRDVSNIAQEHNCLDE 469
S ++ N+GRT L + T V C DR GW D A C D
Sbjct: 38 SLVTFKFNTNTGRTPLLETMPSLATAAVRLDHFCH---DRCANGWYDDCGDAGCKGCHDY 94
Query: 470 YDP-EYQCPFL 499
Y P EY C FL
Sbjct: 95 YRPDEYDCVFL 105
>03_03_0149 +
14843880-14844145,14846501-14846561,14846608-14846720,
14848448-14848540,14849578-14849793,14853773-14856023
Length = 999
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = +2
Query: 302 TKYQIKMNSGRTLPNVLVTGTPGVGKSTLCRNLADRTKFGWRDVSNIAQEHNCLDEYDPE 481
T +++ N R + V V+G GVGK+TL RN V NI ++ NC D + E
Sbjct: 275 TDQELQKNDNRPIV-VSVSGKSGVGKTTLVRN-----------VYNIMKKKNCFDVHAME 322
Query: 482 YQCPFLNEDKV 514
P L +
Sbjct: 323 SFAPHLTAPNI 333
>03_04_0140 +
17638335-17638583,17638843-17639061,17639206-17639443,
17640614-17640809,17640888-17640942,17641495-17641645,
17642501-17642809,17642950-17643215,17643311-17644237,
17644386-17644712
Length = 978
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 314 IKMNSGRTLPNVLVTGTPGVGKSTLCRNLADR 409
I++ S RT N ++ G PGVGK+ + LA R
Sbjct: 274 IQILSRRTKNNPVLIGEPGVGKTAIAEGLAQR 305
>05_06_0104 -
25603568-25603867,25603965-25604162,25604247-25604526,
25604615-25605419,25605518-25606673
Length = 912
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 314 IKMNSGRTLPNVLVTGTPGVGKSTLCRNLADR 409
+++ S RT N ++ G PGVGK+ + LA R
Sbjct: 194 VRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR 225
>04_04_0251 +
23930789-23930960,23931065-23931128,23931641-23931747,
23931832-23931899,23932068-23932097,23932357-23932460,
23932558-23932662,23932815-23932904,23932982-23933057,
23933292-23933361,23933799-23933869,23933945-23934035,
23934192-23934319,23934547-23934675,23934762-23934902
Length = 481
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 347 VLVTGTPGVGKSTLCRNLADRTKFGWRDVSNIAQ 448
VL+ G PG GK++LC+ LA + ++ ++ Q
Sbjct: 219 VLLHGPPGTGKTSLCKALAQKLSIRFKSRYSMCQ 252
>04_01_0063 - 630345-633743
Length = 1132
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 323 NSGRTLPNVLVTGTPGVGKSTLCRNLAD 406
NSG PN V G PG+G+ R L+D
Sbjct: 628 NSGFVFPNTDVPGFPGIGELKSLRELSD 655
>02_02_0074 +
6567362-6567550,6567685-6567753,6567869-6567970,
6568386-6568627,6569057-6569195,6569298-6569333,
6569838-6569972,6570315-6570547,6571204-6571298,
6571331-6571374,6571808-6571888
Length = 454
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 341 PNVLVTGTPGVGKSTLCRNLAD-RTKFGWR 427
P V++ G GKSTLC+ L K GW+
Sbjct: 122 PRVIIVGPSDSGKSTLCKMLLSWAAKQGWK 151
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 332 RTLPNVLVTGTPGVGKSTLCRNLADR 409
RT N ++ G PGVGK+ + LA R
Sbjct: 351 RTKNNPVIIGEPGVGKTAIAEGLAQR 376
>01_01_0548 -
4033077-4033349,4034007-4034261,4034362-4034533,
4034616-4034839,4035168-4035332,4035591-4035881,
4035971-4036303,4036391-4036485,4036570-4036689,
4036778-4036934,4037176-4037279,4037383-4037543,
4037636-4037952,4038655-4038936,4039020-4039321,
4039453-4039543,4040227-4040280,4040367-4040684,
4041008-4041092,4041178-4041266,4041474-4041594,
4042136-4042431
Length = 1434
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 350 LVTGTPGVGKSTLCRNLADRTKFGWRDVSNIAQEHNCLDEYDPEYQCPFLNE 505
L+ G P GK+TL LA R G + NI + L+E+ P+ ++++
Sbjct: 172 LLLGPPSSGKTTLLLALAGRLGPGLKVSGNITYNGHHLNEFVPQRTSAYVSQ 223
>12_01_0777 -
7095081-7096259,7096636-7096725,7096827-7096902,
7097150-7097367,7097502-7097717,7097922-7098107,
7098181-7098303,7098399-7098514,7099254-7099832,
7101485-7101517,7102485-7103679,7103732-7103797,
7104843-7104905,7105328-7105411
Length = 1407
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 332 RTLPNVLVTGTPGVGKSTLCRNLADRTKFG 421
RT N + G PGVGK+ + LA R G
Sbjct: 776 RTKNNPCLIGEPGVGKTAIAEGLAQRISTG 805
>02_05_0449 -
29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 341 PNVLVTGTPGVGKSTLCR 394
P+++ G PG GKS+LCR
Sbjct: 718 PHIIFKGPPGSGKSSLCR 735
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +2
Query: 350 LVTGTPGVGKSTLCRNLADRTKFGWRDVSNIAQEHNCLDEYDPEYQCPFLNE 505
L+ G PG GK+TL LA + + + + + +DE+ P+ ++++
Sbjct: 233 LLLGPPGSGKTTLLLALAGKLEDNLKVSGKVTYNGHGMDEFVPQRTAAYISQ 284
>11_03_0031 -
9094643-9095824,9095945-9096034,9096141-9096216,
9096759-9096976,9097283-9097512,9097617-9097683,
9097863-9098048,9098164-9098295,9098380-9098492,
9098771-9098777
Length = 766
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 332 RTLPNVLVTGTPGVGKSTLCRNLADRTKFG 421
RT N + G PGVGK+ + LA R G
Sbjct: 107 RTKNNPCLIGEPGVGKTAIAEGLAQRIAAG 136
>04_03_0784 -
19610370-19611548,19611830-19611919,19612001-19612076,
19612917-19613134,19613333-19613548,19613974-19614159,
19614242-19614364,19614456-19614571,19615126-19615588
Length = 888
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 332 RTLPNVLVTGTPGVGKSTLCRNLADRTKFG 421
RT N + G PGVGK+ + LA R G
Sbjct: 257 RTKNNPCLIGEPGVGKTAIAEGLAQRISNG 286
>02_04_0114 +
19879468-19880671,19882007-19882179,19882265-19882605,
19882698-19882977,19883070-19883267,19883380-19883652
Length = 822
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 332 RTLPNVLVTGTPGVGKSTLCRNLADRTKFG 421
RT + ++ G PGVGK+ + LA R G
Sbjct: 215 RTKNSAVLVGAPGVGKTAIAEGLARRVAAG 244
>01_05_0660 -
24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 350 LVTGTPGVGKSTLCRNLADRTKFGWRDVSNIAQEHNCLDEYDPEYQCPFLNE 505
L+ G PG GK+TL LA R + + + ++E+ PE ++++
Sbjct: 194 LLLGPPGSGKTTLLLALAGRLGKDLKASGKVTYNGHGMEEFVPERTAAYISQ 245
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,492,089
Number of Sequences: 37544
Number of extensions: 339377
Number of successful extensions: 854
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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