Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_K04
         (881 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   1.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.9  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   4.9  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   6.5  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   6.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   6.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   6.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   8.6  
AF487333-1|AAL93262.1|   80|Apis mellifera integrin betaPS protein.    22   8.6  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 653 KKMYGRLVHLQNHH 694
           +K YG + HL NHH
Sbjct: 267 RKNYGGVYHLDNHH 280


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 134 YLSYIYLWIVYYYLATVSNFLFY 202
           Y    Y+  V+YYL+T  N L Y
Sbjct: 326 YTILTYMSGVFYYLSTTVNPLLY 348


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2

Query: 278 CGYFSSSFTKYQIKMNSGRTLPNVLVTGTPGVGKSTL 388
           CG  S+  T Y+I  +S   L  VL TGT G+G +T+
Sbjct: 123 CG--SAITTAYRIHADSCDRLW-VLDTGTIGIGNTTI 156


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 511 LIFIQKRALIFRIIFIQAIVFL 446
           LIF + RA  F  +FI  I+ +
Sbjct: 294 LIFTRDRAFYFTTVFIPGIILV 315


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 511 LIFIQKRALIFRIIFIQAIVFL 446
           LIF + RA  F  +FI  I+ +
Sbjct: 263 LIFTRDRAFYFTTVFIPGIILV 284


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 511 LIFIQKRALIFRIIFIQAIVFL 446
           LIF + RA  F  +FI  I+ +
Sbjct: 314 LIFTRDRAFYFTTVFIPGIILV 335


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 511 LIFIQKRALIFRIIFIQAIVFL 446
           LIF + RA  F  +FI  I+ +
Sbjct: 263 LIFTRDRAFYFTTVFIPGIILV 284


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 405 TELNSVGGMYQISPKNTIAWMNMILNIN 488
           +E+N   G+Y    K+T+ W    L ++
Sbjct: 7   SEINPKEGLYDEGGKHTVHWFRKGLRLH 34


>AF487333-1|AAL93262.1|   80|Apis mellifera integrin betaPS protein.
          Length = 80

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 435 DTSLQPNLVRSAKFLHNVDLPTPG 364
           DTS   +LVR+A    N+D P  G
Sbjct: 38  DTSHFASLVRNASVSGNLDAPEGG 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,338
Number of Sequences: 438
Number of extensions: 4687
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)