Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_J22
         (953 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    30   0.12 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   0.63 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   5.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.9 bits (64), Expect = 0.12
 Identities = 19/55 (34%), Positives = 20/55 (36%)
 Frame = -2

Query: 394 PPPGXXXXXRNPKGXPKXPXPPXXGPKXXXXPPXXPGGPPXPPHFXXGXAPXXPP 230
           PPP       NP G P+    P         P    G PP PP    G AP  PP
Sbjct: 263 PPP---IRPPNPMGGPRPQISPQNSNLSGGMPSGMVG-PPRPPMPMQGGAPGGPP 313



 Score = 26.2 bits (55), Expect = 1.5
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 348 QKXQXPPKXAQKXPXPPPXXRGGP 277
           Q  Q PP   Q  P  PP   GGP
Sbjct: 252 QGMQRPPMMGQPPPIRPPNPMGGP 275



 Score = 25.4 bits (53), Expect = 2.6
 Identities = 13/40 (32%), Positives = 13/40 (32%)
 Frame = -2

Query: 349 PKXPXPPXXGPKXXXXPPXXPGGPPXPPHFXXGXAPXXPP 230
           P    PP  G      PP   G  P PP       P  PP
Sbjct: 195 PGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPP 234


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 27.5 bits (58), Expect = 0.63
 Identities = 17/51 (33%), Positives = 17/51 (33%)
 Frame = -2

Query: 361 PKGXPKXPXPPXXGPKXXXXPPXXPGGPPXPPHFXXGXAPXXPPXKGXRXP 209
           PK     P P    P     P   PG P  PP       P  PP  G R P
Sbjct: 72  PKPNISIPPPTMNMPPR---PGMIPGMPGAPPLLMGPNGPLPPPMMGMRPP 119



 Score = 26.2 bits (55), Expect = 1.5
 Identities = 18/53 (33%), Positives = 18/53 (33%)
 Frame = -3

Query: 333 PPKXAQKXPXPPPXXRGGPHXPPIFXXGGPPXPPXLRGXGXPXPXFFXGXXXP 175
           PPK       PPP     P   P    G P  PP L G   P P    G   P
Sbjct: 71  PPKP--NISIPPPTMNMPPR--PGMIPGMPGAPPLLMGPNGPLPPPMMGMRPP 119


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 18/60 (30%), Positives = 18/60 (30%)
 Frame = -2

Query: 835 GPXGGGPAXGXXXXXXXXXXXXXXXPRXP*XGRGXXWGPXRGGGXXWVKXPPPGGXGAXG 656
           G  GGG A                    P  G G   G   GGG      P PGG G  G
Sbjct: 172 GGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGG 231



 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +2

Query: 233 GGXGGPPXXKMGGXWGPPRXXGGGXG 310
           G  GG P    G   GP    GGG G
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGGGGGGG 231


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 554 PXPPPXGGXXXXXAGGRXGXP 492
           P PPP G      AGG  G P
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGP 606



 Score = 23.8 bits (49), Expect = 7.8
 Identities = 19/63 (30%), Positives = 20/63 (31%)
 Frame = -2

Query: 364 NPKGXPKXPXPPXXGPKXXXXPPXXPGGPPXPPHFXXGXAPXXPPXKGXRXPXTPXFXGX 185
           N +  P  P PP  GP     P    GGP   P    G  P  P   G      P     
Sbjct: 578 NAQPPPAPPPPPPMGP----PPSPLAGGPLGGP---AGSRPPLPNLLGFGGAAPPVTILV 630

Query: 184 PXP 176
           P P
Sbjct: 631 PYP 633


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +2

Query: 233 GGXGGPPXXKMGGXWGPPRXXGGGXG 310
           GG GGP     GG  G     GG  G
Sbjct: 842 GGAGGPLRGSSGGAGGGSSGGGGSGG 867


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,889
Number of Sequences: 2352
Number of extensions: 11745
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)