Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_J18
         (877 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004850-1|AAO45206.1|  252|Drosophila melanogaster RE68138p pro...   226   3e-59
AE014134-829|AAF52190.2|  252|Drosophila melanogaster CG3792-PA ...   226   3e-59
AY113399-1|AAM29404.1|  221|Drosophila melanogaster RE09466p pro...    57   4e-08
AE014296-807|AAF47870.2|  221|Drosophila melanogaster CG1265-PB ...    57   4e-08

>BT004850-1|AAO45206.1|  252|Drosophila melanogaster RE68138p
           protein.
          Length = 252

 Score =  226 bits (553), Expect = 3e-59
 Identities = 110/223 (49%), Positives = 148/223 (66%)
 Frame = +2

Query: 170 MAEILKGLLLGVLSQKCYNEYFLKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXXPQIFKI 349
           M ++++   L ++S+KCY+ YFL +NFLDVPCFK+                   PQ+ KI
Sbjct: 1   MTDLIRQGALFLMSEKCYDNYFLYHNFLDVPCFKALLSKGLGLAIIAGSVLVKVPQVLKI 60

Query: 350 LQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAALVLHYGG 529
           L SKS EGINI GV L+L AI+ + +Y+++ G+PFSAWG+ TFLAIQT  IA LVL + G
Sbjct: 61  LNSKSGEGINIVGVVLDLLAISFHLSYNFMHGYPFSAWGDSTFLAIQTVTIAVLVLFFNG 120

Query: 530 APMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPIILIAKSIQIGTNYKNGSTGQL 709
              + G+FL  Y  ++ VL SG T   +L+T+Q+  +PI+L+ K  Q  TNY+ GSTGQL
Sbjct: 121 RKAQSGLFLVGYVVLMYVLNSGLTPMSVLFTIQSCNIPILLVGKLSQAYTNYQAGSTGQL 180

Query: 710 SFITCFLLFGGSVARIFTSIQETGDSIIIXTYCVSTIANGAIV 838
           S  T  ++F GSVARIFTSIQETGD +II T+  ST AN  I+
Sbjct: 181 SAATVIMMFAGSVARIFTSIQETGDFMIILTFIASTFANSVIL 223


>AE014134-829|AAF52190.2|  252|Drosophila melanogaster CG3792-PA
           protein.
          Length = 252

 Score =  226 bits (553), Expect = 3e-59
 Identities = 110/223 (49%), Positives = 148/223 (66%)
 Frame = +2

Query: 170 MAEILKGLLLGVLSQKCYNEYFLKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXXPQIFKI 349
           M ++++   L ++S+KCY+ YFL +NFLDVPCFK+                   PQ+ KI
Sbjct: 1   MTDLIRQGALFLMSEKCYDNYFLYHNFLDVPCFKALLSKGLGLAIIAGSVLVKVPQVLKI 60

Query: 350 LQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAALVLHYGG 529
           L SKS EGINI GV L+L AI+ + +Y+++ G+PFSAWG+ TFLAIQT  IA LVL + G
Sbjct: 61  LNSKSGEGINIVGVVLDLLAISFHLSYNFMHGYPFSAWGDSTFLAIQTVTIAVLVLFFNG 120

Query: 530 APMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPIILIAKSIQIGTNYKNGSTGQL 709
              + G+FL  Y  ++ VL SG T   +L+T+Q+  +PI+L+ K  Q  TNY+ GSTGQL
Sbjct: 121 RKAQSGLFLVGYVVLMYVLNSGLTPMSVLFTIQSCNIPILLVGKLSQAYTNYQAGSTGQL 180

Query: 710 SFITCFLLFGGSVARIFTSIQETGDSIIIXTYCVSTIANGAIV 838
           S  T  ++F GSVARIFTSIQETGD +II T+  ST AN  I+
Sbjct: 181 SAATVIMMFAGSVARIFTSIQETGDFMIILTFIASTFANSVIL 223


>AY113399-1|AAM29404.1|  221|Drosophila melanogaster RE09466p
           protein.
          Length = 221

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
 Frame = +2

Query: 332 PQIFKILQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAAL 511
           PQI  I  ++S++GI++ G+ LELF+ T   +Y+Y  G+ F ++ E   L +Q   +   
Sbjct: 39  PQINTIRANESSKGISVLGLCLELFSYTVMLSYNYTSGYDFLSYMEYPVLLLQEYALIYY 98

Query: 512 VLHYGGAPMKGGIFLSVYCAIVSVLV-SGYTSTDILWTMQAVTVPIILIAKSIQIGTNYK 688
              Y     +    +++  +IV+ L+        IL  +     PI   +K +Q+    +
Sbjct: 99  AFKYQDLLGRRTQVVAILYSIVATLIYMKLFPIIILKFLVPFCTPIGATSKVLQLLAILR 158

Query: 689 NGSTGQLSFITCFLLFGGSVARIFTSIQETGDSIIIXTYCVSTIANGAIVYKCC 850
                 +S  T  L    ++ RI+T   ++ D +++  + +ST  + ++    C
Sbjct: 159 TKDASSVSRTTWALSAFTNMTRIYTVFFQSHDWMLLSNFLISTFLSASVFTAAC 212


>AE014296-807|AAF47870.2|  221|Drosophila melanogaster CG1265-PB
           protein.
          Length = 221

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
 Frame = +2

Query: 332 PQIFKILQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAAL 511
           PQI  I  ++S++GI++ G+ LELF+ T   +Y+Y  G+ F ++ E   L +Q   +   
Sbjct: 39  PQINTIRANESSKGISVLGLCLELFSYTVMLSYNYTSGYDFLSYMEYPVLLLQEYALIYY 98

Query: 512 VLHYGGAPMKGGIFLSVYCAIVSVLV-SGYTSTDILWTMQAVTVPIILIAKSIQIGTNYK 688
              Y     +    +++  +IV+ L+        IL  +     PI   +K +Q+    +
Sbjct: 99  AFKYQDLLGRRTQVVAILYSIVATLIYMKLFPIIILKFLVPFCTPIGATSKVLQLLAILR 158

Query: 689 NGSTGQLSFITCFLLFGGSVARIFTSIQETGDSIIIXTYCVSTIANGAIVYKCC 850
                 +S  T  L    ++ RI+T   ++ D +++  + +ST  + ++    C
Sbjct: 159 TKDASSVSRTTWALSAFTNMTRIYTVFFQSHDWMLLSNFLISTFLSASVFTAAC 212


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,113,830
Number of Sequences: 53049
Number of extensions: 877008
Number of successful extensions: 2316
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2312
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)