Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_J15
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...    38   0.015
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...    32   0.73 
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...    29   3.9  

>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score = 37.5 bits (83), Expect = 0.015
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +1

Query: 262 PXLSADDLXXXLGRNIXHXSXXXESATXXIGLWXSDXQLVGWT 390
           P     DL   +GRNI H S   E+A   IGLW    +LV +T
Sbjct: 142 PGTIRGDLAVVVGRNIIHGSDGPETAKAEIGLWFEPRELVSYT 184


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 23/86 (26%), Positives = 30/86 (34%)
 Frame = +1

Query: 130 FFPXSI*ST*HSATMWSLWYGRAXXYVXTXRXFXXAXLTQLXRTPXLSADDLXXXLGRNI 309
           FFP  I        +   W G     V + R    A    L   P     DL    GRN+
Sbjct: 58  FFPGLIEYITSGPVVCMAWEGNGV--VASARKLIGAT-NPLQAEPGTIRGDLAVQTGRNV 114

Query: 310 XHXSXXXESATXXIGLWXSDXQLVGW 387
            H S   ++    I LW  + +L  W
Sbjct: 115 VHGSDSPDNGKREIALWFKEGELCEW 140


>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = +1

Query: 181 LWYGRAXXYVXTXRXFXXAXLTQLXRTPXLSADDLXXXLGRNIXHXSXXXESATXXIGLW 360
           +W G+    V T R    A    L   P     D    +GRN+ H S   E+A   I LW
Sbjct: 76  VWEGKQV--VSTGRKLVGAT-NPLAAEPGTIRGDFAVDIGRNVIHGSDSVENARKEIALW 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,835,533
Number of Sequences: 37544
Number of extensions: 75443
Number of successful extensions: 91
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)