Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_J15
         (919 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13107-1|CAA31500.1|  153|Drosophila melanogaster protein ( Dros...    45   2e-04
AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p pro...    45   2e-04
AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA...    45   2e-04

>X13107-1|CAA31500.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterawd mRNA ( abnormal wing disc ).
           ).
          Length = 153

 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = +1

Query: 262 PXLSADDLXXXLGRNIXHXSXXXESATXXIGLWXSDXQLVGWTPATXNSXY 414
           P     D    +GRNI H S   ESA   I LW ++ +LV WTPA  +  Y
Sbjct: 102 PGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIY 152



 Score = 39.5 bits (88), Expect = 0.006
 Identities = 24/52 (46%), Positives = 28/52 (53%)
 Frame = +3

Query: 123 RAVLPGVNLKYMTFSDHVVPMVWEGXXVCXXGPSIXXRTTNPTXSHPXTLRG 278
           R   PG+ + YM  S  VVPMVWEG  V   G  +    TNP  S P T+RG
Sbjct: 59  RPFFPGL-VNYMN-SGPVVPMVWEGLNVVKTGRQMLG-ATNPADSLPGTIRG 107


>AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p
           protein.
          Length = 153

 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = +1

Query: 262 PXLSADDLXXXLGRNIXHXSXXXESATXXIGLWXSDXQLVGWTPATXNSXY 414
           P     D    +GRNI H S   ESA   I LW ++ +LV WTPA  +  Y
Sbjct: 102 PGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIY 152



 Score = 39.5 bits (88), Expect = 0.006
 Identities = 24/52 (46%), Positives = 28/52 (53%)
 Frame = +3

Query: 123 RAVLPGVNLKYMTFSDHVVPMVWEGXXVCXXGPSIXXRTTNPTXSHPXTLRG 278
           R   PG+ + YM  S  VVPMVWEG  V   G  +    TNP  S P T+RG
Sbjct: 59  RPFFPGL-VNYMN-SGPVVPMVWEGLNVVKTGRQMLG-ATNPADSLPGTIRG 107


>AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA
           protein.
          Length = 172

 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = +1

Query: 262 PXLSADDLXXXLGRNIXHXSXXXESATXXIGLWXSDXQLVGWTPATXNSXY 414
           P     D    +GRNI H S   ESA   I LW ++ +LV WTPA  +  Y
Sbjct: 121 PGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIY 171



 Score = 39.5 bits (88), Expect = 0.006
 Identities = 24/52 (46%), Positives = 28/52 (53%)
 Frame = +3

Query: 123 RAVLPGVNLKYMTFSDHVVPMVWEGXXVCXXGPSIXXRTTNPTXSHPXTLRG 278
           R   PG+ + YM  S  VVPMVWEG  V   G  +    TNP  S P T+RG
Sbjct: 78  RPFFPGL-VNYMN-SGPVVPMVWEGLNVVKTGRQMLG-ATNPADSLPGTIRG 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,098,947
Number of Sequences: 53049
Number of extensions: 123177
Number of successful extensions: 173
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)