Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_J14
         (1066 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   6.7  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 2.9
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 766 ARNGXGXGGXAGXNXTKGAPRXGPAHH 846
           A  G G  G +G     G+P  G  HH
Sbjct: 682 AGGGAGSSGGSGGGLASGSPYGGGGHH 708


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 6.7
 Identities = 31/151 (20%), Positives = 40/151 (26%), Gaps = 5/151 (3%)
 Frame = +1

Query: 400 PAQHGXAPTPKXXKERRGKARXXXXXXEEQXEXPHPHGAKXXXGPPNAQKRHXXTXKQXE 579
           P   G A  P    E+   AR      + Q   P   G +   GP           +  E
Sbjct: 198 PGPRGYAGIPGTKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQGEVGPRGFPGRPGE 257

Query: 580 XXXTXNPXXRXEXGNKATXKNPXXXXXXXXXXXXXXXXGETPGXXPQXXR----XXSAAA 747
                 P  R E G+K                      G T    P+  +          
Sbjct: 258 KGVPGTPGVRGERGDKGVCIKGEKGQKGAKGEEVYGATGTTTTTGPKGEKGDRGEPGEPG 317

Query: 748 RTXEDKARNGXGXGGXAGXNXTKGAP-RXGP 837
           R+ E       G  G  G    KG P + GP
Sbjct: 318 RSGEKGQAGDRGQVGERGHKGEKGLPGQPGP 348


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.309    0.128    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,059
Number of Sequences: 2352
Number of extensions: 5823
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 118807611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)