Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_J14
(1066 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 33 1.8
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 33 1.8
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 33 1.8
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 33 1.8
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 33 1.8
X07881-1|CAA30728.1| 309|Homo sapiens proline-rich protein G1 p... 31 5.4
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 5.4
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 5.4
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.1 bits (72), Expect = 1.8
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +3
Query: 375 PTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXGPTQRXKEA 554
P + K + R +P ++ SP P RR PPPRR P +R +
Sbjct: 533 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPS 592
Query: 555 P 557
P
Sbjct: 593 P 593
Score = 31.1 bits (67), Expect = 7.1
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +3
Query: 351 RDSXEXGXPTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXG 530
R S K P+ TR +P+ K SP P + PPP RR
Sbjct: 651 RRSPSLSSKHRKGSSPSRSTREARSPQPN---KRHSPSPRPRAPQTSSSPPPVRRGASSS 707
Query: 531 PTQRXKEAP 557
P +R +P
Sbjct: 708 PQRRQSPSP 716
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.1 bits (72), Expect = 1.8
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +3
Query: 375 PTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXGPTQRXKEA 554
P + K + R +P ++ SP P RR PPPRR P +R +
Sbjct: 533 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPS 592
Query: 555 P 557
P
Sbjct: 593 P 593
Score = 31.1 bits (67), Expect = 7.1
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +3
Query: 351 RDSXEXGXPTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXG 530
R S K P+ TR +P+ K SP P + PPP RR
Sbjct: 651 RRSPSLSSKHRKGSSPSRSTREARSPQPN---KRHSPSPRPRAPQTSSSPPPVRRGASSS 707
Query: 531 PTQRXKEAP 557
P +R +P
Sbjct: 708 PQRRQSPSP 716
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.1 bits (72), Expect = 1.8
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +3
Query: 375 PTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXGPTQRXKEA 554
P + K + R +P ++ SP P RR PPPRR P +R +
Sbjct: 533 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPS 592
Query: 555 P 557
P
Sbjct: 593 P 593
Score = 31.1 bits (67), Expect = 7.1
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +3
Query: 351 RDSXEXGXPTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXG 530
R S K P+ TR +P+ K SP P + PPP RR
Sbjct: 651 RRSPSLSSKHRKGSSPSRSTREARSPQPN---KRHSPSPRPRAPQTSSSPPPVRRGASSS 707
Query: 531 PTQRXKEAP 557
P +R +P
Sbjct: 708 PQRRQSPSP 716
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.1 bits (72), Expect = 1.8
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +3
Query: 375 PTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXGPTQRXKEA 554
P + K + R +P ++ SP P RR PPPRR P +R +
Sbjct: 531 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPS 590
Query: 555 P 557
P
Sbjct: 591 P 591
Score = 31.1 bits (67), Expect = 7.1
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +3
Query: 351 RDSXEXGXPTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXG 530
R S K P+ TR +P+ K SP P + PPP RR
Sbjct: 649 RRSPSLSSKHRKGSSPSRSTREARSPQPN---KRHSPSPRPRAPQTSSSPPPVRRGASSS 705
Query: 531 PTQRXKEAP 557
P +R +P
Sbjct: 706 PQRRQSPSP 714
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.1 bits (72), Expect = 1.8
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +3
Query: 375 PTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXGPTQRXKEA 554
P + K + R +P ++ SP P RR PPPRR P +R +
Sbjct: 531 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPS 590
Query: 555 P 557
P
Sbjct: 591 P 591
Score = 31.1 bits (67), Expect = 7.1
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +3
Query: 351 RDSXEXGXPTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXG 530
R S K P+ TR +P+ K SP P + PPP RR
Sbjct: 649 RRSPSLSSKHRKGSSPSRSTREARSPQPN---KRHSPSPRPRAPQTSSSPPPVRRGASSS 705
Query: 531 PTQRXKEAP 557
P +R +P
Sbjct: 706 PQRRQSPSP 714
>X07881-1|CAA30728.1| 309|Homo sapiens proline-rich protein G1
protein.
Length = 309
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/77 (23%), Positives = 23/77 (29%)
Frame = +3
Query: 369 GXPTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXGPTQRXK 548
G P K P++ G P G+ P PPPPRR + P
Sbjct: 217 GPPPRPGKPEGSPSQGGNKPRGPPPHPGKPQGPPPQEGNKPQRPPPPRRPQGPPPPGGNP 276
Query: 549 EAPXXXQTAXXTGXGQP 599
+ P G P
Sbjct: 277 QQPLPPPAGKPQGPPPP 293
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.5 bits (68), Expect = 5.4
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 399 TXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXGPTQRXKEAP 557
T R +P ++ SP P RR PPPRR P +R +P
Sbjct: 550 TKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSP 602
Score = 31.1 bits (67), Expect = 7.1
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +3
Query: 351 RDSXEXGXPTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXG 530
R S K P+ TR +P+ K SP P + PPP RR
Sbjct: 660 RRSPSLSSKHRKGSSPSRSTREARSPQPN---KRHSPSPRPRAPQTSSSPPPVRRGASSS 716
Query: 531 PTQRXKEAP 557
P +R +P
Sbjct: 717 PQRRQSPSP 725
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.5 bits (68), Expect = 5.4
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 399 TXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXGPTQRXKEAP 557
T R +P ++ SP P RR PPPRR P +R +P
Sbjct: 550 TKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSP 602
Score = 31.1 bits (67), Expect = 7.1
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +3
Query: 351 RDSXEXGXPTHKXKXPTXPTRXGXNPEXTXGKKGESPXXXPXXRRAXXXPPPPRRXEXXG 530
R S K P+ TR +P+ K SP P + PPP RR
Sbjct: 660 RRSPSLSSKHRKGSSPSRSTREARSPQPN---KRHSPSPRPRAPQTSSSPPPVRRGASSS 716
Query: 531 PTQRXKEAP 557
P +R +P
Sbjct: 717 PQRRQSPSP 725
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.309 0.128 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,096,214
Number of Sequences: 237096
Number of extensions: 1204759
Number of successful extensions: 1566
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14539514738
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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