Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_J14
         (1066 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2028|AAN09586.2| 3269|Drosophila melanogaster CG32602-P...    30   6.2  

>AE014298-2028|AAN09586.2| 3269|Drosophila melanogaster CG32602-PA
            protein.
          Length = 3269

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 30/145 (20%), Positives = 43/145 (29%)
 Frame = +2

Query: 146  GXTXKXQXKXXTTXKXXXQTTRGPTGXKXXHTVTQMNTXGKTRXAHTXXGKKXTRXEPXA 325
            G T K      T       TT  PT        T   T G +    T    + T  +P  
Sbjct: 1096 GTTAKPTTLKPTEGTTAKPTTLKPTEGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTT 1155

Query: 326  XXPXKRKTARLXXXRXTHPQXKXAXXPNTARXQPRXNXRKEGGKPARXAXXKKSXXXXPT 505
              P +  TA+    + T         P T +       +    KP +    K +      
Sbjct: 1156 LKPTEGTTAKPTTLKPTEGTSGTTAKPTTLKPTEGTTAKPTTLKPTKGTTAKSTTLKPTE 1215

Query: 506  PTAXRXXXAHPTXKRGTXXPPNSXK 580
             T+ +     PT   GT   P + K
Sbjct: 1216 GTSAKPTTLKPT--EGTTAKPTTLK 1238


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.309    0.128    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,525,239
Number of Sequences: 53049
Number of extensions: 334027
Number of successful extensions: 358
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5474209272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)