Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_J10
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.76 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   1.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.3  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 0.76
 Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
 Frame = +1

Query: 484 PXXKXPPPPGXGXXXFGPXXLXPPXXPXA-PGFRGGXXVXPPXXGGXXXSPXXGXTP 651
           P    P PPG       P  + P   P A PG + G    PP   G    P  G  P
Sbjct: 214 PGGMYPQPPGV------PMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPP 264



 Score = 23.8 bits (49), Expect = 7.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 555 GGGKGXGXKXXXPXPRGGG 499
           GGG+  G K     P GGG
Sbjct: 513 GGGRAEGDKVTFQIPNGGG 531


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = -3

Query: 775 GXGGGFXXXXXGGGALLXNPPQXAXFRGXGPXGG 674
           G GGG      GGG L+   P      G G  GG
Sbjct: 813 GNGGGGGAGASGGGFLITGDPSDTIGAGGGGAGG 846



 Score = 23.4 bits (48), Expect = 9.3
 Identities = 12/36 (33%), Positives = 13/36 (36%)
 Frame = -3

Query: 838 GVXPGGXPGIFXXPRGGGXXXGXGGGFXXXXXGGGA 731
           G   GG  G      GG      GGG      GGG+
Sbjct: 838 GAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGGS 873


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 15/46 (32%), Positives = 16/46 (34%)
 Frame = +1

Query: 418 NXXPPFXXXFFXRXRGGXGXXXPXXKXPPPPGXGXXXFGPXXLXPP 555
           N  PP    +  R   G     P    PPPPG       P  L PP
Sbjct: 509 NDGPPHGAGYDGRDLTGGPLGPPP---PPPPGGAVLNIPPQFLPPP 551



 Score = 23.4 bits (48), Expect = 9.3
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +2

Query: 542 PXPPPXXPXPXAFGGG 589
           P PPP  P P    GG
Sbjct: 586 PPPPPMGPPPSPLAGG 601


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
 Frame = -1

Query: 582 PKAXGXGXXGGGKGXGX-KXXXPXPRGGG 499
           P A G G  GG  G G      P P GGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 23.8 bits (49), Expect = 7.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 577 SXGPGXXGGGXGXGXQK 527
           S GPG  GGG G G  +
Sbjct: 219 SGGPGPGGGGGGGGRDR 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,864
Number of Sequences: 2352
Number of extensions: 8001
Number of successful extensions: 59
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)