Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_J02
         (886 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E45E07 Cluster: PREDICTED: similar to SI:dZ173M2...    38   0.26 
UniRef50_Q4YA57 Cluster: Putative uncharacterized protein; n=1; ...    35   3.2  
UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme...    33   7.3  
UniRef50_UPI0000DBF85A Cluster: UPI0000DBF85A related cluster; n...    33   9.7  

>UniRef50_UPI0000E45E07 Cluster: PREDICTED: similar to
           SI:dZ173M20.16 (novel transposase); n=6;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           SI:dZ173M20.16 (novel transposase) - Strongylocentrotus
           purpuratus
          Length = 115

 Score = 38.3 bits (85), Expect = 0.26
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +2

Query: 608 KSILXV*FVCNASLMFQNVVA*WPXSTHDTTIINHXD 718
           K  + V  +CNAS    NV+A WP STHD+ I+   D
Sbjct: 49  KHSINVQLICNASYRITNVMARWPGSTHDSRILRVCD 85


>UniRef50_Q4YA57 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 326

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = -3

Query: 365 KFILPF*RYTQIWSH*INQFIHNTFAQKSIVKFVIIDLRHVIQTIFIFLTI*YRPHYHY- 189
           +F+  F  +     H I+QF+      +S + F    L H+ Q +  FL   Y   +HY 
Sbjct: 149 QFLRSFLHFHYQLLHHIHQFL------RSFLHFHYQLLHHIRQFLRSFLHFHYHHPFHYP 202

Query: 188 LHH-NPLSFEIIPYHYHHCYNMPI 120
           LHH +      + +HYHH ++ P+
Sbjct: 203 LHHIHQFLRNFLHFHYHHPFHYPL 226



 Score = 34.7 bits (76), Expect = 3.2
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = -3

Query: 323 H*INQFIHNTFAQKSIVKFVIIDLRHVIQTIFIFLTI*YRPHYHY-LHH-NPLSFEIIPY 150
           H I+QF+ N F            L H+ Q +  FL   Y   +HY LHH +      + +
Sbjct: 204 HHIHQFLRN-FLHFHYHHPFHYPLHHIHQFLRSFLHFHYHHPFHYPLHHIHQFLRNFLHF 262

Query: 149 HYHHCYNMPI 120
           HYHH ++ P+
Sbjct: 263 HYHHPFHYPL 272



 Score = 33.5 bits (73), Expect = 7.3
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = -3

Query: 323 H*INQFIHNTFAQKSIVKFVIIDLRHVIQTIFIFLTI*YRPHYHY-LHH-NPLSFEIIPY 150
           H I+QF+ N F            + H+ Q +  FL   Y   +HY LHH +      + +
Sbjct: 76  HHIHQFLRN-FLHFHYHHPFHYPIHHIHQFLRNFLHFHYHHPFHYPLHHIHQFLRNFLHF 134

Query: 149 HYHHCYNMPI 120
           HYHH ++ P+
Sbjct: 135 HYHHPFHYPL 144



 Score = 33.5 bits (73), Expect = 7.3
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = -3

Query: 323 H*INQFIHNTFAQKSIVKFVIIDLRHVIQTIFIFLTI*YRPHYHY--LHH-NPLSFEIIP 153
           H I+QF+ N F            L H+ Q +  FL   Y   +HY  LHH +      + 
Sbjct: 250 HHIHQFLRN-FLHFHYHHPFHYPLHHIHQFLRNFLHFHYHHPFHYQLLHHIHQFLRSFLH 308

Query: 152 YHYHHCYNMPI 120
           +HYHH ++ P+
Sbjct: 309 FHYHHPFHYPL 319



 Score = 33.1 bits (72), Expect = 9.7
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 254 LRHVIQTIFIFLTI*YRPHYHY-LHH-NPLSFEIIPYHYHHCYNMPI 120
           L H+ Q +  FL   Y   +HY LHH +      + +HYHH ++ P+
Sbjct: 203 LHHIHQFLRNFLHFHYHHPFHYPLHHIHQFLRSFLHFHYHHPFHYPL 249


>UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme
           maturase - Tetrahymena paravorax
          Length = 514

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 23/81 (28%), Positives = 38/81 (46%)
 Frame = +1

Query: 373 KSTRYYNLYLFIAIAKLYLIFVVLQNHTQQEFYNTAGHSYTNTITW*AIYLHSYYTLIPL 552
           K  ++Y + +FI I K + IF     +   EFYN   +          I ++ YY L+ L
Sbjct: 77  KLIKFYYILIFILI-KNFDIFYSYDYYIITEFYNLNVNLINGLFLIHPILIYIYYALLIL 135

Query: 553 HFIFVLQIQI*ERNLEIEKEY 615
            FI+++ I    +N    K+Y
Sbjct: 136 LFIYIISINNYFKNKFYMKKY 156


>UniRef50_UPI0000DBF85A Cluster: UPI0000DBF85A related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBF85A UniRef100 entry -
           Rattus norvegicus
          Length = 126

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = -3

Query: 221 LTI*YRPHYHYLHHNPLSFEIIPYHYHHCYN 129
           + + Y  H+H+LHH+   +  + +HYHH ++
Sbjct: 55  IAVYYYHHHHHLHHHYHHYHHLHHHYHHYHH 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,687,004
Number of Sequences: 1657284
Number of extensions: 11094040
Number of successful extensions: 27016
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26551
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)