Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_I24
         (1002 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    26   2.0  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    25   2.7  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   3.6  
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    25   4.7  
L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     24   8.2  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     24   8.2  

>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 495 GL*LSNPVSTLGSRMTRDPSISPFSSNVPSLNCLSRCS 382
           GL  S+P  +  +   +  S S  SS  P+L+CLS+CS
Sbjct: 118 GLDRSHPNRSTTASSEQACSGSSSSSPEPNLDCLSKCS 155


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 398 QLRDGTLEENGLMDGSRVILLPSVETGLLSQRPENTVMQA 517
           +++  TL  NG +D +  ILL   E G   + P N ++QA
Sbjct: 174 EVKHCTLIANGDVDRATQILLHRQEAGQSLKGPSNNMLQA 213


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 3.6
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
 Frame = +1

Query: 307  RQKHRRASKETSFKETKG--VKGSNMLTTSRETIEGR-HVGRKWTDGRVAGHPTTKRRDR 477
            ++K ++A  E   ++ KG  +  + + T+  ++ + R  +      G  +G P TKR+ R
Sbjct: 991  QKKRQKAMDEGLSQKQKGRILSKATVSTSESDSDDSRLKIASGDESGGESGAPATKRKRR 1050

Query: 478  IAESKTREYSDASIR 522
            IA  +  E SD S R
Sbjct: 1051 IASDE--EDSDGSQR 1063


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -1

Query: 213 PVARSIFYTCITLQIIINQQKTTH*LTKITQLFYCKNRNNRVTPDPQFFD 64
           P  +++F+TC+  ++I  +   TH    +  +F  +N  N V     F D
Sbjct: 30  PQPKAVFFTCMDSRMIPTRFTETH----VGDMFVVRNAGNLVPHAEHFQD 75


>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
 Frame = +2

Query: 266 IHTTTGGNFSVSLNGKSTVEHXXXXXXXXXXXXXDRICLLHRERQLRDG-TLEENGLMDG 442
           + T TG   ++ +    T+E+             D+  L+   +QL DG TL +  +   
Sbjct: 5   VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64

Query: 443 SRVILLPSVETGL 481
           S + L+  +  G+
Sbjct: 65  STLHLVLRLRGGM 77



 Score = 23.8 bits (49), Expect = 8.2
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
 Frame = +2

Query: 266 IHTTTGGNFSVSLNGKSTVEHXXXXXXXXXXXXXDRICLLHRERQLRDG-TLEENGLMDG 442
           + T TG   ++ +    T+E+             D+  L+   +QL DG TL +  +   
Sbjct: 81  VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140

Query: 443 SRVILLPSVETGL 481
           S + L+  +  G+
Sbjct: 141 STLHLVLRLRGGM 153


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 565 FTTQEIIDLGVIQGL*CLHHCILGSLTQ 482
           F  QE+ID+G  + +    +  LG++T+
Sbjct: 248 FLAQEVIDMGAHEAVRKFEYTFLGTVTE 275


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,527
Number of Sequences: 2352
Number of extensions: 15462
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 110174532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)