Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_I24
(1002 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical ... 32 0.74
U41993-4|AAA83446.4| 574|Caenorhabditis elegans Hypothetical pr... 30 2.3
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 29 6.9
U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical pr... 29 6.9
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 29 6.9
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 29 6.9
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 29 6.9
U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical pr... 29 6.9
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 29 6.9
U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical p... 28 9.1
Z81576-2|CAB04644.1| 522|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical p... 28 9.1
AF067608-12|AAC17651.1| 458|Caenorhabditis elegans Hypothetical... 28 9.1
>AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical
protein T11F8.4 protein.
Length = 535
Score = 31.9 bits (69), Expect = 0.74
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +1
Query: 295 REFERQKHRRASKETSFKETKGVKGSNMLTTSRETIEGRHVGRKWTD 435
+E +++K+ K++ K+ KG KG +L S+ET + R GR+ TD
Sbjct: 396 QESDKRKNSDRKKKSERKK-KGSKGDMILEKSKETKDHRESGRRLTD 441
>U41993-4|AAA83446.4| 574|Caenorhabditis elegans Hypothetical
protein F44A2.3 protein.
Length = 574
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +2
Query: 467 VETGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLGDHMMLIQLQLSTLHSSS 646
+E G++S R N M L + + LSG+S L L + +HM + Q + +
Sbjct: 161 IENGIVSARVAN--MGLLTDTINQKFGSVLSGQSRLQLEEAICEHMNRLTQQHFSTRLAR 218
Query: 647 CPRSLGILQL 676
PRSL +L
Sbjct: 219 IPRSLSAKEL 228
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 473 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 595
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 369 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 409
>U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical
protein W02C12.3h protein.
Length = 361
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 473 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 595
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 232 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 272
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 473 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 595
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 369 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 409
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 473 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 595
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 344 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 384
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 473 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 595
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 335 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 375
>U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical
protein W02C12.3e protein.
Length = 439
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 473 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 595
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 310 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 350
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 473 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 595
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 395 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 435
>U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical
protein W02C12.3b protein.
Length = 499
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 473 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 595
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 370 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 410
>Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -2
Query: 128 LHSYFIARIEITGSRQTPSFLMWPSS 51
LHSYF A E SRQ P +LM P S
Sbjct: 263 LHSYFYATAEARISRQ-PDYLMLPDS 287
>Z81576-2|CAB04644.1| 522|Caenorhabditis elegans Hypothetical
protein R10E8.3 protein.
Length = 522
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +1
Query: 208 YWNRSVRVWLYPKHGHNFEYTYHHGW*FFREFERQKHRRASKETSFKET 354
Y NRS++ W +P N + HG F R S +ET
Sbjct: 169 YANRSIQTWFFPSQDQNVYISMAHG--FLENISTFTFSRVSSAQMLQET 215
>Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -2
Query: 128 LHSYFIARIEITGSRQTPSFLMWPSS 51
LHSYF A E SRQ P +LM P S
Sbjct: 263 LHSYFYATAEARISRQ-PDYLMLPDS 287
>AF067608-12|AAC17651.1| 458|Caenorhabditis elegans Hypothetical
protein B0511.2 protein.
Length = 458
Score = 28.3 bits (60), Expect = 9.1
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = +1
Query: 13 YXFHYRESLRFDTDDGHIKKLGVWRDPVISILAIK*LCNLS*LVCGFLLIYYNL*CNTCV 192
Y Y E L ++ + +K ++ D + L + CN + F ++YN+ N +
Sbjct: 150 YYSKYLEKLWYNISENLLKYGKIYADSGLKSLEPQSRCNFELKIKFFQELWYNISENP-L 208
Query: 193 KYGTCYWNRSVRVWLYPKHGHNFE 264
KYG Y + ++ L P+ NFE
Sbjct: 209 KYGKIYADSELKS-LEPQSRCNFE 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,202,386
Number of Sequences: 27780
Number of extensions: 349694
Number of successful extensions: 939
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2626021738
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -