Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_I22
         (1087 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27 pro...    38   0.064
L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.     38   0.064
BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27 (...    38   0.064
BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.       38   0.064
BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-l...    38   0.064
BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27 (...    38   0.064
AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27 ...    38   0.064
AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27 p...    38   0.064
AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27 p...    37   0.11 

>U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score = 37.9 bits (84), Expect = 0.064
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = +1

Query: 169 VPHPNSDIMDVKCXVLLCXYXSXIAHAQRVVVXSVDAQRSFAXPTGGRARLTD 327
           V  PNS  MDVKC        +  +HAQ VV+  V        PTGG+ARLT+
Sbjct: 25  VQSPNSYFMDVKCPGCY-KITTVFSHAQTVVLC-VGCSTVLCQPTGGKARLTE 75


>L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.
          Length = 84

 Score = 37.9 bits (84), Expect = 0.064
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = +1

Query: 169 VPHPNSDIMDVKCXVLLCXYXSXIAHAQRVVVXSVDAQRSFAXPTGGRARLTD 327
           V  PNS  MDVKC        +  +HAQ VV+  V        PTGG+ARLT+
Sbjct: 25  VQSPNSYFMDVKCPGCY-KITTVFSHAQTVVLC-VGCSTVLCQPTGGKARLTE 75


>BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score = 37.9 bits (84), Expect = 0.064
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = +1

Query: 169 VPHPNSDIMDVKCXVLLCXYXSXIAHAQRVVVXSVDAQRSFAXPTGGRARLTD 327
           V  PNS  MDVKC        +  +HAQ VV+  V        PTGG+ARLT+
Sbjct: 25  VQSPNSYFMDVKCPGCY-KITTVFSHAQTVVLC-VGCSTVLCQPTGGKARLTE 75


>BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.
          Length = 113

 Score = 37.9 bits (84), Expect = 0.064
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = +1

Query: 169 VPHPNSDIMDVKCXVLLCXYXSXIAHAQRVVVXSVDAQRSFAXPTGGRARLTD 327
           V  PNS  MDVKC        +  +HAQ VV+  V        PTGG+ARLT+
Sbjct: 41  VQSPNSYFMDVKCPGCY-KITTVFSHAQTVVLC-VGCSTVLCQPTGGKARLTE 91


>BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-like
           protein.
          Length = 84

 Score = 37.9 bits (84), Expect = 0.064
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = +1

Query: 169 VPHPNSDIMDVKCXVLLCXYXSXIAHAQRVVVXSVDAQRSFAXPTGGRARLTD 327
           V  PNS  MDVKC        +  +HAQ VV+  V        PTGG+ARLT+
Sbjct: 25  VQSPNSYFMDVKCPGCY-KITTVFSHAQTVVLC-VGCSTVLCQPTGGKARLTE 75


>BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score = 37.9 bits (84), Expect = 0.064
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = +1

Query: 169 VPHPNSDIMDVKCXVLLCXYXSXIAHAQRVVVXSVDAQRSFAXPTGGRARLTD 327
           V  PNS  MDVKC        +  +HAQ VV+  V        PTGG+ARLT+
Sbjct: 25  VQSPNSYFMDVKCPGCY-KITTVFSHAQTVVLC-VGCSTVLCQPTGGKARLTE 75


>AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score = 37.9 bits (84), Expect = 0.064
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = +1

Query: 169 VPHPNSDIMDVKCXVLLCXYXSXIAHAQRVVVXSVDAQRSFAXPTGGRARLTD 327
           V  PNS  MDVKC        +  +HAQ VV+  V        PTGG+ARLT+
Sbjct: 25  VQSPNSYFMDVKCPGCY-KITTVFSHAQTVVLC-VGCSTVLCQPTGGKARLTE 75


>AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score = 37.9 bits (84), Expect = 0.064
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = +1

Query: 169 VPHPNSDIMDVKCXVLLCXYXSXIAHAQRVVVXSVDAQRSFAXPTGGRARLTD 327
           V  PNS  MDVKC        +  +HAQ VV+  V        PTGG+ARLT+
Sbjct: 25  VQSPNSYFMDVKCPGCY-KITTVFSHAQTVVLC-VGCSTVLCQPTGGKARLTE 75


>AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27
           protein.
          Length = 69

 Score = 37.1 bits (82), Expect = 0.11
 Identities = 23/52 (44%), Positives = 27/52 (51%)
 Frame = +1

Query: 169 VPHPNSDIMDVKCXVLLCXYXSXIAHAQRVVVXSVDAQRSFAXPTGGRARLT 324
           V  PNS  MDVKC        +  +HAQ VV+  V        PTGG+ARLT
Sbjct: 20  VQSPNSYFMDVKCPGCY-KITTVFSHAQTVVLC-VGCSTVLCQPTGGKARLT 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,185,163
Number of Sequences: 237096
Number of extensions: 854011
Number of successful extensions: 850
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14926498020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)